Alternatives and similar repositories for multiOmicsIntegration

Users that are interested in multiOmicsIntegration are comparing it to the libraries listed below

• umccr / neoantigens
  🏺 Exploring novel tumor epitope identification
  ☆34Updated 4 years ago
• LieberInstitute / INTERACT
  ☆11Updated 2 years ago
• Novartis / DRUG-seq
  DRUG (Digital RNA with pertUrbation of Genes)-seq data analysis pipeline
  ☆32Updated 2 months ago
• bowang-lab / IntegrAO
  Integrate Any Omics: Towards genome-wide data integration for patient stratification
  ☆53Updated 2 weeks ago
• kundajelab / alzheimers_parkinsons
  Collaboration with Montine, Chang, and Montgomery labs on Alzheimers / Parkinson's ATAC-seq analysis
  ☆46Updated 4 years ago
• davidnboone / tcga_brca_rnaseq
  jupyter notebook; perform differential gene expression analysis using DESeq2 on TCGA RNAseq data
  ☆32Updated 6 years ago
• greenelab / RNAseq_titration_results
  Cross-platform normalization enables machine learning model training on microarray and RNA-seq data simultaneously
  ☆36Updated 2 years ago
• ding-lab / somaticwrapper
  Detect somatic variants from tumor and normal WGS/WXS data
  ☆16Updated last month
• Oshlack / splatter-paper
  Data and analysis for the Splatter paper
  ☆29Updated 7 years ago
• kendomaniac / rCASC
  rCASC: reproducible Classification Analysis of Single Cell Sequencing Data
  ☆13Updated last month
• BIMSBbioinfo / maui
  Multi-omics Autoencoder Integration: Deep learning-based heterogenous data analysis toolkit
  ☆49Updated last year
• OSU-BMBL / ssread
  A single-cell and spatial RNA-seq database for Alzheimer’s Disease
  ☆23Updated 10 months ago
• TencentAILabHealthcare / scTranslator
  ☆36Updated last week
• epigen / KPNN
  Knowledge-primed neural networks
  ☆37Updated 2 years ago
• glasgowcompbio / pyMultiOmics
  Python toolbox for multi-omics data mapping and analysis
  ☆24Updated 2 years ago
• noriakis / CBNplot
  Bayesian network plot for the enrichment analysis results
  ☆64Updated 8 months ago
• mickaelleclercq / BioDiscML
  Large-scale automatic feature selection for biomarker discovery in high-dimensional OMICs data
  ☆30Updated last year
• CancerRxGene / gdsctools
  Tools related to the Genomics of Drug Sensitivity in Cancer (GDSC) projects (http://www.cancerrxgene.org/ )
  ☆36Updated 3 years ago
• jingxinfu / TIDEpy
  TIDE (Tumor Immune Dysfunction and Exclusion), a gene expression biomarker to predict the clinical response to immune checkpoint blockade…
  ☆35Updated 2 years ago
• PacktPublishing / Deep-Learning-for-Genomics-
  ☆32Updated 2 years ago
• dwgoon / nezzle
  Network Visualization using both GUI and Programming
  ☆28Updated last week
• bhklab / PGx_Guidelines
  ☆10Updated 3 years ago
• YuLab-SMU / GeoTcgaData
  Processed rna-seq data, copy number variation data, and methylation data on GEO and TCGA
  ☆26Updated 2 years ago
• wuaipinglab / ImmuCC
  Cell-Centric View of Tissue Transcriptome Measuring Cellular Compositions of Immune Microenvironment From Mouse RNA-Seq Data.
  ☆25Updated 3 years ago
• BIMSBbioinfo / flexynesis
  A deep-learning based multi-modal data integration suite that aims to achieve synesis in a flexible manner
  ☆54Updated last week
• astrazeneca-cgr-publications / JARVIS
  JARVIS: a comprehensive deep learning framework to prioritise non-coding variants in whole genomes
  ☆23Updated 4 months ago
• uc-bd2k / GREIN
  GREIN : GEO RNA-seq Experiments Interactive Navigator
  ☆49Updated 6 years ago
• KlugerLab / ALRA
  Imputation method for scRNA-seq based on low-rank approximation
  ☆74Updated last year
• immunogenomics / amp_phase1_ra
  Zhang, et al, Nature Immunology, 2019. Use single-cell transcriptomics and proteomics to study autoimmune diseases.
  ☆20Updated 2 months ago
• doraadong / UNIFAN
  Unsupervised cell functional annotation for single-cell RNA-Seq
  ☆22Updated 2 years ago