vd4mmind / multiOmicsIntegration
Github Repository for multiOmics Integration project involving genomics, epigenomics and transcriptomics
β10Updated 4 years ago
Alternatives and similar repositories for multiOmicsIntegration:
Users that are interested in multiOmicsIntegration are comparing it to the libraries listed below
- β10Updated 3 years ago
- πΊ Exploring novel tumor epitope identificationβ35Updated 4 years ago
- Data and analysis for the Splatter paperβ28Updated 7 years ago
- β33Updated 2 years ago
- A single-cell and spatial RNA-seq database for Alzheimerβs Diseaseβ22Updated 7 months ago
- Proteome-Wide Association Studyβ44Updated 3 years ago
- Knowledge-primed neural networksβ35Updated last year
- The main repository for ACTIVA: realistic single-cell RNA-seq generation with automatic cell-type identification using introspective variβ¦β11Updated 2 years ago
- Transcription Factor Binding Prediction from ATAC-seq and scATAC-seq with Deep Neural Networksβ27Updated last week
- A motif discovery tool to detect the occurrences of known motifsβ20Updated 4 years ago
- BioInformatics Agent (BIA): Unleashing the Power of Large Language Models to Reshape Bioinformatics Workflowβ25Updated 6 months ago
- Tools related to the Genomics of Drug Sensitivity in Cancer (GDSC) projects (http://www.cancerrxgene.org/ )β35Updated 3 years ago
- Alignment and antibody assembly pipelines for Croote et al. (Science, 2018)β10Updated 3 years ago
- JARVIS: a comprehensive deep learning framework to prioritise non-coding variants in whole genomesβ22Updated last month
- A deep-learning based multi-modal data integration suite that aims to achieve synesis in a flexible mannerβ32Updated this week
- β11Updated 2 years ago
- Universal RObust Peak Annotatorβ15Updated last year
- scRNAseq integration with triplet neural networksβ40Updated 2 years ago
- Large-scale automatic feature selection for biomarker discovery in high-dimensional OMICs dataβ28Updated 10 months ago
- Detect somatic variants from tumor and normal WGS/WXS dataβ15Updated last month
- jupyter notebook; perform differential gene expression analysis using DESeq2 on TCGA RNAseq dataβ32Updated 5 years ago
- A continually expanding collection of RNA-seq toolsβ48Updated 4 months ago
- β18Updated 2 years ago
- Notebooks accompanying the paper "Navigating the pitfalls of applying machine learning in genomics"β44Updated last year
- Python toolbox for multi-omics data mapping and analysisβ23Updated last year
- Network Visualization using both GUI and Programmingβ28Updated 8 months ago
- devCellPy is a Python package designed for hierarchical multilayered classification of cells based on single-cell RNA-sequencing.β25Updated 11 months ago
- single-cell decorrelated module networksβ20Updated 5 months ago
- scMatch: a single-cell gene expression profile annotation tool using reference datasetsβ24Updated 3 years ago