mims-harvard / SHEPHERDLinks
SHEPHERD: Few shot learning for phenotype-driven diagnosis of patients with rare genetic diseases
☆77Updated 4 months ago
Alternatives and similar repositories for SHEPHERD
Users that are interested in SHEPHERD are comparing it to the libraries listed below
Sorting:
- Gene2Vec: Distributed Representation of Genes Based on Co-Expression☆125Updated 3 years ago
- P-NET, Biologically informed deep neural network for prostate cancer classification and discovery☆163Updated 4 years ago
- KGWAS: novel genetics discovery enabled by massive functional genomics knowledge graph☆75Updated 8 months ago
- Framework for Interpretable Neural Networks☆111Updated 7 months ago
- PlaNet: Predicting population response to drugs via clinical knowledge graph☆31Updated 8 months ago
- BulkRNABert and MOJO☆31Updated 4 months ago
- Madrigal: Multimodal AI predicts clinical outcomes of drug combinations from preclinical data☆38Updated 3 months ago
- MOVE (Multi-Omics Variational autoEncoder) for integrating multi-omics data and identifying cross modal associations☆89Updated last year
- Backend library for conversational AI in biomedicine☆191Updated 2 weeks ago
- ☆69Updated 2 years ago
- ☆31Updated last year
- An explainable multi-omics graph integration method based on graph convolutional networks to predict cancer genes.☆160Updated 3 years ago
- High-Dimensional Gene Expression and Morphology Profiles of Cells across 28,000 Genetic and Chemical Perturbations☆51Updated 3 months ago
- Multi-omics integration method using AE and GCN☆38Updated 2 years ago
- Code and dataset for SNP2Vec paper☆21Updated 2 years ago
- ☆30Updated 2 weeks ago
- ☆96Updated 2 months ago
- Code for paper "A deep learning framework for drug repurposing via emulating clinical trials on real world patient data" (Accepted to Nat…☆98Updated 3 years ago
- Integrate Any Omics: Towards genome-wide data integration for patient stratification☆56Updated 6 months ago
- Generating biologically informed neural networks☆52Updated 9 months ago
- Network-based project to explore gene connectivity through biological scales☆23Updated last year
- A resource of adverse drug effects extracted from FDA structured product labels☆84Updated 5 months ago
- ☆132Updated 7 months ago
- ☆295Updated last year
- ☆150Updated 10 months ago
- Provided files are a partial extraction of the Orphanet knowledge base on Rare Diseases☆52Updated 4 months ago
- ClinVec: Unified Embeddings of Clinical Codes Enable Knowledge-Grounded AI in Medicine☆72Updated 3 months ago
- Create cell sentences from sequencing data☆23Updated last year
- Biological Network Integration using Convolutions☆62Updated last year
- Discovering novel cell types across heterogenous single-cell experiments☆123Updated 2 years ago