gerstung-lab / DelphiLinks
Modelling human health trajectories using generative transformers
☆152Updated this week
Alternatives and similar repositories for Delphi
Users that are interested in Delphi are comparing it to the libraries listed below
Sorting:
- Benchmark agents on BioML tasks☆43Updated this week
- ☆146Updated 8 months ago
- Madrigal: Multimodal AI predicts clinical outcomes of drug combinations from preclinical data☆35Updated last month
- ClinVec: Unified Embeddings of Clinical Codes Enable Knowledge-Grounded AI in Medicine☆69Updated last month
- SHEPHERD: Few shot learning for phenotype-driven diagnosis of patients with rare genetic diseases☆73Updated 2 months ago
- Integrate Any Omics: Towards genome-wide data integration for patient stratification☆56Updated 4 months ago
- BioDiscoveryAgent is an LLM-based AI agent for closed-loop design of genetic perturbation experiments☆87Updated 2 months ago
- ☆85Updated last week
- A spectral method for assessing and combining multiple data visualizations☆50Updated 2 years ago
- The light frontend for BioChatter, in pure Python☆54Updated 2 months ago
- Cell2Sentence: Teaching Large Language Models the Language of Biology☆195Updated 2 months ago
- A pipeline that accurately simulates high quality publicly cancer genomes (VCFs, CNAs and SVs).☆28Updated 2 weeks ago
- Framework for Interpretable Neural Networks☆109Updated 5 months ago
- Deep Generative Modelling of Patient Timelines using Electronic Health Records☆63Updated 3 months ago
- Code and data for Cell-o1.☆23Updated 2 months ago
- Tofu is a Python tool for generating synthetic UK Biobank data.☆62Updated 2 years ago
- GenoML (genoml2) is an open source Python package. It is an automated machine learning (autoML) platform for genomics data☆33Updated 3 months ago
- Electronic Health Record Analysis with Python.☆307Updated this week
- Combinatorial prediction of therapeutic perturbations using causally-inspired neural networks☆53Updated last week
- EmbedGEM: A framework to evaluate the utility of embeddings for genetic discovery☆21Updated 11 months ago
- Backend library for conversational AI in biomedicine☆180Updated 2 months ago
- Orthrus is a mature RNA model for RNA property prediction. It uses a mamba encoder backbone, a variant of state-space models specifical…☆77Updated last month
- ☆30Updated this week
- TISSUE (Transcript Imputation with Spatial Single-cell Uncertainty Estimation) provides tools for estimating well-calibrated uncertainty …☆32Updated last year
- ☆33Updated last year
- ☆125Updated 5 months ago
- ☆282Updated last year
- A curated list of biomedical knowledge graphs and of resources for their construction.☆61Updated 11 months ago
- MASI Lab Implementation of PheWAS in Python☆28Updated 10 months ago
- KGWAS: novel genetics discovery enabled by massive functional genomics knowledge graph☆73Updated 6 months ago