Alternatives and similar repositories for covid

Users that are interested in covid are comparing it to the libraries listed below

• mrc-ide / EpiEstim
  A tool to estimate time varying instantaneous reproduction number during epidemics
  ☆99Updated 2 months ago
• timriffe / covid_age
  COVerAGE-DB: COVID-19 cases, deaths, and tests by age and sex
  ☆58Updated last year
• HopkinsIDD / hit-covid
  Data and Codebook for the HIT-COVID Project
  ☆22Updated 4 years ago
• mrc-ide / COVID19_CFR_submission
  Repository for all scripts required to replicate the CFR analysis for paper submission.
  ☆71Updated 4 years ago
• rs-delve / covid19_datasets
  Interfacing several COVID-19 related datasets
  ☆45Updated 3 years ago
• epiforecasts / socialmixr
  R package for deriving social mixing matrices from survey data.
  ☆40Updated this week
• epiforecasts / EpiNow
  Estimate Realtime Case Counts and Time-varying Epidemiological Parameters
  ☆33Updated 2 years ago
• cmmid / covid-uk
  Scenario analyses for COVID-19 outbreak in the United Kingdom
  ☆66Updated 5 years ago
• mrc-ide / covid19-forecasts-orderly
  ☆29Updated 3 months ago
• epiforecasts / covid-rt-estimates
  National and subnational estimates of the time-varying reproduction number for Covid-19
  ☆34Updated 3 years ago
• midas-network / covid19-scenario-modeling-hub_archive
  COVID-19 Scenario Modeling Hub
  ☆67Updated 3 months ago
• epiforecasts / covidregionaldata
  An interface to subnational and national level COVID-19 data. For all countries supported, this includes a daily time-series of cases. Wh…
  ☆37Updated 2 years ago
• COVID19StatePolicy / SocialDistancing
  ☆99Updated 2 years ago
• ImperialCollegeLondon / epidemia
  epidemia package
  ☆48Updated 3 years ago
• dsfsi / covid19africa
  Africa open COVID-19 data working group
  ☆47Updated 4 years ago
• alsnhll / SEIR_COVID19
  SEIR model for COVID-19 infection, including different clinical trajectories of infection
  ☆195Updated 4 years ago
• jriou / covid_adjusted_cfr
  ☆88Updated 5 years ago
• adamkucharski / 2020-ncov
  Accompanying code for: Kucharski AJ, Russell TW et al. Early dynamics of transmission and control of COVID-19: a mathematical modelling s…
  ☆71Updated 2 years ago
• epiforecasts / EpiNow2
  Estimate Realtime Case Counts and Time-varying Epidemiological Parameters
  ☆131Updated 2 weeks ago
• cdcepi / FluSight-forecasts
  FluSight Forecast Submissions
  ☆19Updated last year
• cmmid / ringbp
  ☆53Updated last year
• jstockwin / EpiEstimApp
  Source code for the EpiEstim app.
  ☆33Updated 3 weeks ago
• CoronaNetDataScience / corona_tscs
  This is the raw data repository (policy record format) of the CoronaNet project on government responses to the COVID-19 pandemic.
  ☆99Updated last year
• opensafely / risk-factors-research
  This is the code and configuration for our paper, OpenSAFELY: factors associated with COVID-19-related hospital death in the linked elect…
  ☆33Updated last year
• timchurches / blog
  Personal blog
  ☆40Updated 5 years ago
• VictimOfMaths / COVID-19
  Plots and analysis relating to the pandemic
  ☆217Updated last year
• FluSightNetwork / cdc-flusight-ensemble
  Guidelines and forecasts for a collaborative U.S. influenza forecasting project.
  ☆39Updated 5 years ago
• cmu-delphi / delphi-epidata
  An open API for epidemiological data.
  ☆104Updated last week
• mrc-ide / squire
  SEIR transmission model of COVID-19. Documentation at:
  ☆51Updated last year
• Financial-Times / coronavirus-excess-mortality-data
  Excess mortality data compiled by the FT Visual & Data Journalism team
  ☆158Updated 3 years ago