Alternatives and similar repositories for EpiEstim

Users that are interested in EpiEstim are comparing it to the libraries listed below

• epiforecasts / EpiNow2
  Estimate Realtime Case Counts and Time-varying Epidemiological Parameters
  ☆127Updated this week
• EpiModel / EpiModel-Gallery
  Gallery of Network-Based Epidemic Model Templates for EpiModel
  ☆54Updated 6 months ago
• epiforecasts / EpiNow
  Estimate Realtime Case Counts and Time-varying Epidemiological Parameters
  ☆33Updated 2 years ago
• mrc-ide / squire
  SEIR transmission model of COVID-19. Documentation at:
  ☆51Updated last year
• kieshaprem / synthetic-contact-matrices
  Updates to the synthetic contact matrices
  ☆36Updated last year
• epiforecasts / socialmixr
  R package for deriving social mixing matrices from survey data.
  ☆38Updated 2 weeks ago
• ImperialCollegeLondon / epidemia
  epidemia package
  ☆48Updated 2 years ago
• jstockwin / EpiEstimApp
  Source code for the EpiEstim app.
  ☆31Updated 4 years ago
• EpiModel / EpiModelHIV
  Network Models of HIV Transmission Dynamics among MSM and Heterosexuals
  ☆25Updated last month
• EpiModel / EpiModel
  Mathematical Modeling of Infectious Disease Dynamics
  ☆253Updated 2 weeks ago
• timchurches / blog
  Personal blog
  ☆40Updated 4 years ago
• WHO-Collaboratory / collaboratory-epiparameter-community
  ☆41Updated 2 weeks ago
• midas-network / covid19-scenario-modeling-hub_archive
  COVID-19 Scenario Modeling Hub
  ☆68Updated last week
• mac-theobio / McMasterPandemic
  SEIR+ model
  ☆19Updated 8 months ago
• european-modelling-hubs / covid19-forecast-hub-europe_archive
  European Covid-19 Forecast Hub.
  ☆48Updated 6 months ago
• objornstad / epimdr
  R package for "Epidemics: Models and data using R"
  ☆55Updated 2 years ago
• oswaldosantos / EpiDynamics
  An R package with Dynamic Models of infectious diseases
  ☆29Updated 6 months ago
• timriffe / covid_age
  COVerAGE-DB: COVID-19 cases, deaths, and tests by age and sex
  ☆57Updated last year
• cmmid / ringbp
  ☆53Updated last year
• mine-cetinkaya-rundel / covid19-r
  Collection of analyses, packages, visualisations of COVID-19 data in R
  ☆151Updated 2 years ago
• kidusasfaw / spatPomp
  R package for statistical inference of spatiotemporal partially observed Markov processes
  ☆11Updated 4 months ago
• epiforecasts / covid-rt-estimates
  National and subnational estimates of the time-varying reproduction number for Covid-19
  ☆34Updated 2 years ago
• epiforecasts / covidregionaldata
  An interface to subnational and national level COVID-19 data. For all countries supported, this includes a daily time-series of cases. Wh…
  ☆37Updated 2 years ago
• mobs-lab / mixing-patterns
  Inferring high-resolution human mixing patterns for disease modeling
  ☆45Updated 2 years ago
• tianjianzhou / BaySIR
  Semiparametric Bayesian Inference for the Transmission Dynamics of COVID-19 with a State-Space Model
  ☆9Updated 4 years ago
• wxwx1993 / PM_COVID
  Public Available Code and Data to Reproduce Analyses in "Air pollution and COVID-19 mortality in the United States: Strengths and limitat…
  ☆105Updated last year
• adamkucharski / scrapR
  Extract raw underlying data from PDF figures
  ☆55Updated last year
• HopkinsIDD / hit-covid
  Data and Codebook for the HIT-COVID Project
  ☆22Updated 3 years ago
• midas-network / flu-scenario-modeling-hub_archive
  Flu Scenario Modeling Hub
  ☆11Updated 3 weeks ago
• alsnhll / SEIR_COVID19
  SEIR model for COVID-19 infection, including different clinical trajectories of infection
  ☆195Updated 4 years ago