thibautjombart / covid19_cases_from_deaths
Shiny app to infer caes from new deaths of COVID-19
☆11Updated 4 years ago
Related projects: ⓘ
- CRAN Task View: Epidemiology☆20Updated last week
- Quantifying the impacts of public health interventions on transmission of COVID-19 in Australia☆13Updated last year
- Tools and tutorials for multi-level regression and post-stratification of survey data☆10Updated 6 months ago
- Infectious disease model library and utilities☆15Updated 2 years ago
- Analysing epidemic trends using AutoML approaches.☆18Updated 3 years ago
- ☆26Updated this week
- Excess deaths due to COVID-19 pandemic in 2020☆10Updated 2 years ago
- R package to estimate disease severity and under-reporting in real-time, accounting for reporting delays in epidemic time-series☆13Updated last week
- Create Contact Matrices from Population Data☆17Updated 3 weeks ago
- Workshop on hhh4 and the endemic-epidemic framework☆15Updated last year
- Repo for the LSHTM R Users Group (RUG)☆9Updated 2 years ago
- SEIR+ model☆20Updated 3 weeks ago
- Code and data for paper on regression with survey data☆15Updated 8 years ago
- Shiny app providing estimates of future bed occupancy given recent admissions☆12Updated 4 years ago
- An R package to import, clean, and store case data☆25Updated last year
- Analysis of excess mortality in Italy during the COVID-19 pandemic☆15Updated 3 months ago
- Short course on parametric survival analysis☆15Updated last year
- Datalegreya, the typeface that melts text and data visualisation, for R markdown☆45Updated 6 years ago
- Grouped dates in R☆17Updated 3 weeks ago
- R package for estimation and monitoring of the effective reproduction number in a pathogen outbreak/epidemic☆10Updated last week
- Data quality reporting for temporal datasets.☆35Updated 2 weeks ago
- ☣ Risk assessment of travel-related disease spread☆18Updated last year
- Scripts and data for Modelling reporting delay for disease surveillance data using Bayesian methods.☆14Updated 5 years ago
- Tools to look at xml data. Has functions similar to the `tree` command line tool ( xml_view_tree). Allows one to find paths quickly, incl…☆25Updated last year
- Iterate multiple realisations of stochastic models☆18Updated 4 months ago
- R Package for individual based epidemiological models☆30Updated 2 weeks ago
- homework problems from the 2nd edition of Statistical Rethinking by Richard McElreath worked in R-INLA☆24Updated 3 years ago
- Analysis of deaths from alcohol-specific causes, drugs and suicide☆25Updated last week
- Stand alone markdowns with embedded shiny apps for various eco&epi models☆25Updated last year
- Reliably return location where command is called from in R.☆41Updated last year