epirecipes / epicookbook
A cookbook of epidemiological models
☆13Updated 6 years ago
Alternatives and similar repositories for epicookbook:
Users that are interested in epicookbook are comparing it to the libraries listed below
- Compute and visualise incidence (reworking of the original incidence package)☆17Updated 3 months ago
- Infectious disease model library and utilities☆15Updated 2 years ago
- ODE modelling in Python☆29Updated 2 weeks ago
- Code for reconstructing influenza dynamics from surveillance data using evidence synthesis techniques☆20Updated 2 years ago
- Good Enough Practices in Scientific Computing☆17Updated 2 weeks ago
- Estimate epidemiological quantities from repeated cross-sectional prevalence measurements☆17Updated last year
- A list of "good practices" for creating a good environment for conference speakers. Based on my own experience as a speaker but prepared …☆30Updated 5 years ago
- Results and software for our paper on structured epidemic modeling☆13Updated 2 years ago
- An R package to manipulate MCMC samples☆17Updated last month
- A fast C++ API for simulating the spread of epidemics on contact networks.☆41Updated last year
- Real time estimation of epidemic Effective Reproduction Number for Luxembourg☆12Updated 2 years ago
- Guide for development and peer-review of statistical software☆43Updated 11 months ago
- Endo A. et al., "Introduction to the particle Markov-chain Monte Carlo." Epidemics, 2019.☆13Updated 2 years ago
- R package for estimating excess deaths from daily count data☆20Updated 7 months ago
- Two-stage interrupted time series analysis of excess mortality in Italy during the COVID-19 pandemic☆15Updated 2 weeks ago
- Computational Methods for Numerical Analysis☆16Updated last year
- 🔵 R interpreter for executable documents☆15Updated 3 years ago
- CRAN Task View: Epidemiology☆23Updated last month
- Tidy methods for Bayesian treatment effect models☆16Updated last month
- ☆22Updated last year
- Presentation at the Joint Statistical Meetings 2021☆12Updated 3 years ago
- Latent Dirichlet Allocation coupled with Bayesian Time Series analyses☆25Updated last year
- Tutorial on parallelization tools for distributed computing (multiple computers or cluster nodes) in R, Python, Matlab, and C.☆21Updated 5 years ago
- FlexiBLAS API Interface for R☆14Updated 11 months ago
- Chinese Restaurant Process Models for Regression and Clustering. Master branch contains latest stable build.☆12Updated 3 years ago
- R Package For Calling Matlab Through System☆12Updated last year
- Implementation of the Tower Method, a novel approach to handling missing values.☆12Updated 11 months ago
- Topics in statistical computing @ ISU☆18Updated 9 years ago
- Repo for the course Statistical Methods in Infectious Disease Epidemiology at UZH☆18Updated 3 years ago
- statistical models to analyze diagnostic tests☆15Updated 4 years ago