Alternatives and similar repositories for BEARmod

Users that are interested in BEARmod are comparing it to the libraries listed below

• epiforecasts / socialmixr
  Derive social mixing matrices from survey data.
  ☆43Updated last week
• kieshaprem / synthetic-contact-matrices
  Updates to the synthetic contact matrices
  ☆39Updated 2 years ago
• european-modelling-hubs / covid19-forecast-hub-europe_archive
  European Covid-19 Forecast Hub.
  ☆49Updated last year
• mobs-lab / mixing-patterns
  Inferring high-resolution human mixing patterns for disease modeling
  ☆48Updated 3 years ago
• kpzoo / EpiFilter
  Optimised estimates of reproduction numbers over time, which extract more information from an incidence curve than many conventional appr…
  ☆22Updated 2 years ago
• ImperialCollegeLondon / epidemia
  epidemia package
  ☆49Updated 3 years ago
• SABS-R3-Epidemiology / epiabm
  Epidemiological agent-based modelling packages in both python and C++. Published at: https://doi.org/10.5334/jors.449.
  ☆20Updated 4 months ago
• midas-network / covid19-scenario-modeling-hub_archive
  COVID-19 Scenario Modeling Hub
  ☆67Updated 8 months ago
• gasparrini / ItalyCOVIDdeath
  Two-stage interrupted time series analysis of excess mortality in Italy during the COVID-19 pandemic
  ☆17Updated 11 months ago
• jstockwin / EpiEstimApp
  Source code for the EpiEstim app.
  ☆35Updated 5 months ago
• kbubar / vaccine_prioritization
  ☆17Updated 4 years ago
• epiforecasts / EpiNow
  Estimate Realtime Case Counts and Time-varying Epidemiological Parameters
  ☆33Updated 2 years ago
• majelli / Rt
  Bayesian estimation of Rt (C code)
  ☆13Updated 5 years ago
• adamkucharski / 2020-cov-tracing
  Accompanying code for: Kucharski AJ, Klepac P et al. Effectiveness of isolation, testing, contact tracing, and physical distancing on red…
  ☆13Updated 3 years ago
• mrc-ide / squire
  SEIR transmission model of COVID-19. Documentation at:
  ☆51Updated last year
• objornstad / epimdr2
  ☆20Updated 2 years ago
• gkonstantinoudis / ExcessDeathsCOVID
  Excess deaths due to COVID-19 pandemic in 2020
  ☆11Updated 4 years ago
• epiforecasts / covidregionaldata
  An interface to subnational and national level COVID-19 data. For all countries supported, this includes a daily time-series of cases. Wh…
  ☆37Updated 2 years ago
• biouea / covidhm
  ☆23Updated 4 years ago
• akira-endo / COVID19_clustersize
  Analysis of COVID-19 transmission using cluster size distribution
  ☆11Updated 3 years ago
• mrc-ide / individual
  R Package for individual based epidemiological models
  ☆32Updated 5 months ago
• epiforecasts / EpiNow2
  Estimate Realtime Case Counts and Time-varying Epidemiological Parameters
  ☆133Updated this week
• covid19br / nowcaster
  Repository to the R package nowcaster, nowcasting with INLA
  ☆22Updated 4 months ago
• cmmid / hhh4-workshop
  Workshop on hhh4 and the endemic-epidemic framework
  ☆18Updated 3 years ago
• oswaldosantos / EpiDynamics
  An R package with Dynamic Models of infectious diseases
  ☆30Updated last year
• mwaugh0328 / covid-19-map
  US county level interactive map of Covid-19 cases
  ☆19Updated 5 years ago
• epiforecasts / omicron-sgtf-forecast
  In this work, we use S-gene target failure (SGTF) as a proxy of variant status combined with reported case counts to explore the evidence…
  ☆15Updated 3 years ago
• covid-19-Re / estimateR
  R package for estimation and monitoring of the effective reproduction number in a pathogen outbreak/epidemic
  ☆11Updated last year
• andy-iskauskas / hmer
  An R package for Bayes Linear emulation and history matching.
  ☆18Updated last month
• kingaa / sbied
  Simulation-based Inference for Epidemiological Dynamics
  ☆26Updated 8 months ago