Alternatives and similar repositories for squire

Users that are interested in squire are comparing it to the libraries listed below

• mrc-ide / EpiEstim
  A tool to estimate time varying instantaneous reproduction number during epidemics
  ☆99Updated last month
• epiforecasts / socialmixr
  R package for deriving social mixing matrices from survey data.
  ☆38Updated 3 weeks ago
• mac-theobio / McMasterPandemic
  SEIR+ model
  ☆19Updated 10 months ago
• epiforecasts / EpiNow
  Estimate Realtime Case Counts and Time-varying Epidemiological Parameters
  ☆33Updated 2 years ago
• jstockwin / EpiEstimApp
  Source code for the EpiEstim app.
  ☆31Updated 5 years ago
• EpiModel / EpiModel-Gallery
  Gallery of Network-Based Epidemic Model Templates for EpiModel
  ☆55Updated 8 months ago
• biouea / covidhm
  ☆23Updated 4 years ago
• ImperialCollegeLondon / epidemia
  epidemia package
  ☆48Updated 3 years ago
• mrc-ide / individual
  R Package for individual based epidemiological models
  ☆30Updated 10 months ago
• epiforecasts / covidregionaldata
  An interface to subnational and national level COVID-19 data. For all countries supported, this includes a daily time-series of cases. Wh…
  ☆37Updated 2 years ago
• epiforecasts / EpiNow2
  Estimate Realtime Case Counts and Time-varying Epidemiological Parameters
  ☆131Updated this week
• timriffe / covid_age
  COVerAGE-DB: COVID-19 cases, deaths, and tests by age and sex
  ☆57Updated last year
• gasparrini / dlnm
  R package dlnm
  ☆84Updated 2 months ago
• midas-network / covid19-scenario-modeling-hub_archive
  COVID-19 Scenario Modeling Hub
  ☆68Updated 2 months ago
• european-modelling-hubs / covid19-forecast-hub-europe_archive
  European Covid-19 Forecast Hub.
  ☆48Updated 8 months ago
• WHO-Collaboratory / collaboratory-epiparameter-community
  ☆41Updated last month
• adamkucharski / scrapR
  Extract raw underlying data from PDF figures
  ☆55Updated last year
• calumdavey / RUG
  Repo for the LSHTM R Users Group (RUG)
  ☆9Updated 3 years ago
• WorldHealthOrganization / godataR
  R package for easier interactions with the Go.Data API
  ☆13Updated 2 years ago
• oswaldosantos / EpiDynamics
  An R package with Dynamic Models of infectious diseases
  ☆30Updated 8 months ago
• seananderson / covidseir
  Bayesian SEIR model to estimate the effects of social-distancing on COVID-19
  ☆26Updated 4 years ago
• julianfaraway / brinla
  Bayesian Regression with INLA
  ☆50Updated 2 years ago
• timcdlucas / INLAutils
  R package providing utilities for INLA
  ☆31Updated 2 years ago
• cdcepi / Flusight-forecast-data
  ☆40Updated last year
• objornstad / epimdr
  R package for "Epidemics: Models and data using R"
  ☆55Updated 3 years ago
• stewid / SimInf
  A framework for data-driven stochastic disease spread simulations
  ☆35Updated last month
• epiforecasts / covid-rt-estimates
  National and subnational estimates of the time-varying reproduction number for Covid-19
  ☆34Updated 3 years ago
• eric-pedersen / mixed-effect-gams
  Repo for tutorial/paper on mixed-effect GAMs
  ☆123Updated 5 years ago
• gasparrini / CaseTimeSeries
  The case time series design
  ☆25Updated this week
• ropensci / rdhs
  API Client and Data Munging for the Demographic and Health Survey Data
  ☆38Updated 4 months ago