Alternatives and similar repositories for squire

Users that are interested in squire are comparing it to the libraries listed below

• epiforecasts / socialmixr
  R package for deriving social mixing matrices from survey data.
  ☆41Updated 2 weeks ago
• mrc-ide / EpiEstim
  A tool to estimate time varying instantaneous reproduction number during epidemics
  ☆99Updated 3 months ago
• jstockwin / EpiEstimApp
  Source code for the EpiEstim app.
  ☆33Updated 2 months ago
• mac-theobio / McMasterPandemic
  SEIR+ model
  ☆19Updated 2 months ago
• ImperialCollegeLondon / epidemia
  epidemia package
  ☆48Updated 3 years ago
• EpiModel / EpiModel-Gallery
  Gallery of Network-Based Epidemic Model Templates for EpiModel
  ☆55Updated 11 months ago
• epiforecasts / EpiNow
  Estimate Realtime Case Counts and Time-varying Epidemiological Parameters
  ☆33Updated 2 years ago
• epiforecasts / covidregionaldata
  An interface to subnational and national level COVID-19 data. For all countries supported, this includes a daily time-series of cases. Wh…
  ☆37Updated 2 years ago
• timriffe / covid_age
  COVerAGE-DB: COVID-19 cases, deaths, and tests by age and sex
  ☆58Updated last year
• mrc-ide / individual
  R Package for individual based epidemiological models
  ☆30Updated last month
• epiforecasts / EpiNow2
  Estimate Realtime Case Counts and Time-varying Epidemiological Parameters
  ☆131Updated this week
• WHO-Collaboratory / collaboratory-epiparameter-community
  ☆42Updated last month
• oswaldosantos / EpiDynamics
  An R package with Dynamic Models of infectious diseases
  ☆30Updated 10 months ago
• timchurches / blog
  Personal blog
  ☆40Updated 5 years ago
• biouea / covidhm
  ☆23Updated 4 years ago
• cdcepi / Flusight-forecast-data
  ☆40Updated last year
• WorldHealthOrganization / godataR
  R package for easier interactions with the Go.Data API
  ☆13Updated 2 years ago
• midas-network / covid19-scenario-modeling-hub_archive
  COVID-19 Scenario Modeling Hub
  ☆67Updated 5 months ago
• european-modelling-hubs / covid19-forecast-hub-europe_archive
  European Covid-19 Forecast Hub.
  ☆48Updated 11 months ago
• mrc-ide / sircovid
  ☆29Updated 3 months ago
• stewid / SimInf
  A framework for data-driven stochastic disease spread simulations
  ☆35Updated this week
• gasparrini / CaseTimeSeries
  The case time series design
  ☆24Updated 2 months ago
• mrc-ide / COVID19_CFR_submission
  Repository for all scripts required to replicate the CFR analysis for paper submission.
  ☆71Updated 4 years ago
• seananderson / covidseir
  Bayesian SEIR model to estimate the effects of social-distancing on COVID-19
  ☆27Updated 4 years ago
• R4EPI / sitrep
  Report templates and helper functions for applied epidemiology
  ☆42Updated last week
• julianfaraway / brinla
  Bayesian Regression with INLA
  ☆51Updated 2 years ago
• ropensci / rdhs
  API Client and Data Munging for the Demographic and Health Survey Data
  ☆38Updated 7 months ago
• adamkucharski / scrapR
  Extract raw underlying data from PDF figures
  ☆55Updated last year
• gasparrini / dlnm
  R package dlnm
  ☆86Updated 5 months ago
• appliedepi / epirhandbook
  An R package to accompany the Epidemiology R Handbook, a free open-access R reference manual for applied epidemiologists and public healt…
  ☆48Updated 4 months ago