dsurujon / ShinyOmics

Related projects ⓘ

Alternatives and complementary repositories for ShinyOmics

• nuno-agostinho / psichomics
  Interactive R package to quantify, analyse and visualise alternative splicing
  ☆35Updated this week
• mani2012 / BatchQC
  Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.
  ☆34Updated last year
• BIMSBbioinfo / HOT-or-not-examining-the-basis-of-high-occupancy-target-regions
  HOT regions paper
  ☆11Updated 5 years ago
• lfresard / blood_rnaseq_rare_disease_paper
  ☆29Updated 5 years ago
• jtleek / sva-devel
  ☆28Updated 3 months ago
• CapraLab / lab-manuscript-template
  An academic manuscript template with writing tips in both LaTeX and MS Word format generated by the Capra Lab (2/2022)
  ☆19Updated 11 months ago
• costasilvati / consexpression
  Tool for RNA-Seq analysis.
  ☆38Updated 2 years ago
• lindsayrutter / bigPint
  Bioconductor package that makes BIG data pint-sized.
  ☆20Updated 8 months ago
• 123xiaochen / VCFshiny
  ☆26Updated 3 weeks ago
• carpentries-incubator / bioc-rnaseq
  Analysis and Interpretation of Bulk RNA-Seq Data using Bioconductor
  ☆21Updated this week
• ELTEbioinformatics / mulea
  mulea - an R package for enrichment analysis using various ontologies and empirical false discovery rate
  ☆23Updated last month
• grimmlab / BookChapter-RNA-Seq-Analyses
  Best practice RNA-Seq analysis pipeline for reference-based RNA-Seq analysis
  ☆39Updated 3 years ago
• drisso / peixoto2015_tutorial
  Tutorial to reproduce the analysis of Peixoto et al. (2015)
  ☆10Updated 8 years ago
• ge11232002 / TFBSTools
  Software Package for Transcription Factor Binding Site (TFBS) Analysis
  ☆25Updated 3 years ago
• Bioconductor / BiocWorkshops2019
  The official repository of the Bioconductor 2019 Conference Workshops
  ☆25Updated last year
• sonali-bioc / UncertaintyRNA
  This github repository contains code to reproduce the analysis in our paper "Variability in estimated gene expression among commonly used…
  ☆27Updated 9 months ago
• luciorq / isoformic
  Isoform-level functional RNA-Seq analysis 🧬
  ☆20Updated 4 months ago
• hbctraining / variant_analysis
  ☆25Updated last month
• js2264 / tidyCoverage
  ☆20Updated 2 months ago
• bioinformatics-core-shared-training / cruk-summer-school-2018
  Summer school course materials collection
  ☆25Updated 6 years ago
• JD2112 / methylr
  methylR: a single shiny solution from sequencer data to pathway analysis
  ☆11Updated last week
• EvaYiwenWang / Managing_batch_effects
  ☆13Updated last year
• saketkc / rna-seq-snakemake
  Snakemake based pipeline for RNA-Seq analysis
  ☆31Updated 5 years ago
• SamBuckberry / RUN-WGCNA
  Wrapper R scripts for performing a weighted-gene co-expression network analysis (WGCNA)
  ☆27Updated 9 years ago
• brennanpincardiff / drawProteins
  Creating package to draw proteins from Uniprot API
  ☆34Updated 8 months ago
• waldronlab / enrichOmics
  Functional enrichment analysis of high-throughput omics data
  ☆20Updated 4 years ago
• andrewparkermorgan / argyle
  An R package for import, QC and analysis of Illumina Infinium genotyping arrays
  ☆33Updated 6 years ago
• saketkc / riboraptor
  Tool for ribo-seq analysis. Most of the functionality moved to ribotricer (https://github.com/smithlabcode/ribotricer)
  ☆13Updated 3 years ago
• sk-sahu / sig-bio-shiny
  A standalone interactive application for detecting biological significance on a set of genes
  ☆40Updated 3 years ago
• itsvenu / ALPS
  AnaLysis routines for ePigenomicS data - 🏫 Bioconductor project
  ☆16Updated last year