Exploration of Omics data
☆24Dec 10, 2020Updated 5 years ago
Alternatives and similar repositories for ShinyOmics
Users that are interested in ShinyOmics are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A Shiny framework for workflow management and data visualization☆36May 20, 2025Updated last year
- A Nextflow pipeline for NGS variant calling on SARS-CoV-2. From FASTQ files to normalized and annotated VCF files from GATK, BCFtools, Lo…☆20Jul 11, 2024Updated 2 years ago
- Simultaneous multi-sample transcript assembler for RNA-seq data☆18Dec 13, 2024Updated last year
- ☆10Jun 21, 2015Updated 11 years ago
- Online material and code base for the article Coordinates and Intervals in Graph Based Reference Genomes☆11May 2, 2017Updated 9 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- GARFIELD-NGS: Genomic vARiants FIltering by dEep Learning moDels in NGS☆16Mar 4, 2019Updated 7 years ago
- Metascape for Bioinformaticians (MSBio)☆14Jun 30, 2021Updated 5 years ago
- Opossum is a tool to pre-process RNA-seq reads prior to variant calling.☆28Jul 7, 2018Updated 8 years ago
- ChIP-seq/RNA-seq analysis software suite for gene expression heatmaps☆23Oct 12, 2017Updated 8 years ago
- NEW v2: https://github.com/dstolz/epsych2 Epsych is a toolbox for extending Tucker-Davis Technologies hardware and software …☆15Aug 28, 2026Updated 3 weeks ago
- Protocols, data and code associated with the MK-SpikeSeq method for quantifying the absolute abundances of microbiota samples☆12May 19, 2021Updated 5 years ago
- Repository for the workshop "Best practices on development"☆15Mar 19, 2015Updated 11 years ago
- Chromatin ACcessibility and Transcriptomics Unifying Software☆20Oct 25, 2024Updated last year
- Lesson for the shell for genomics☆11Jan 12, 2021Updated 5 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- (Deprecated) Ansible roles to configure assorted compontents for an Ubuntu VM or container configured with https://github.com/galaxyproje…☆11Nov 9, 2024Updated last year
- VVP (VAAST Variant Prioritizer) rapidly prioritizes genetic variants☆18Mar 10, 2018Updated 8 years ago
- Extracts contigs harbouring a target gene / sequence from assemblies and aligns the contigs around the target sequence☆13May 15, 2018Updated 8 years ago
- ☆13Sep 23, 2020Updated 6 years ago
- Scaffolding with assembly likelihood optimization☆21Dec 14, 2020Updated 5 years ago
- A collection of functions compatible with the Opentrons API☆10Oct 28, 2022Updated 3 years ago
- A COVID-19 CoV Genetics (CG) browser to inform therapeutics development☆26Jan 12, 2026Updated 8 months ago
- Rails application for storing and parsing clinical exome VCF files. Gene annotations can be retrieved via Biomart integration from Ensemb…☆10May 7, 2017Updated 9 years ago
- interactive plots for differential expression analysis☆36Apr 30, 2026Updated 4 months ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Tackle data analytics and machine learning challenges and build complex applications with R 3.5☆22Jan 30, 2023Updated 3 years ago
- Subgraph for Curve.fi☆10Mar 20, 2021Updated 5 years ago
- Simulation of rare and common variants based on 1000 genomes data☆19Sep 24, 2021Updated 4 years ago
- Automated optimisation of de-novo transcriptome assembly☆25Nov 11, 2015Updated 10 years ago
- ☆12Apr 21, 2016Updated 10 years ago
- Software for creating and comparing genome fingerprints.☆11Jun 30, 2024Updated 2 years ago
- documentation for trackViewer☆29Aug 6, 2019Updated 7 years ago
- Genotype-free demultiplexing of pooled single-cell RNA-Seq, using a hidden state model for identifying genetically distinct samples withi…☆42Feb 8, 2023Updated 3 years ago
- Sequence Bloom Trees with All/Some split☆11Oct 30, 2018Updated 7 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Visualisation and prioritisation of genomic variants from human exome sequencing projects☆13Apr 23, 2019Updated 7 years ago
- Shiny-Seq: A web based interactive pipeline to analyze RNA-Seq data☆21Apr 24, 2019Updated 7 years ago
- Sweep Inference Framework (controlling for correlation)