Alternatives and similar repositories for patRoon

Users that are interested in patRoon are comparing it to the libraries listed below

• RogerGinBer / RHermes
  RHermes is a semi-targeted metabolomics package to deeply characterize biological and environmental samples.
  ☆28Updated last month
• shuzhao-li-lab / asari
  asari, metabolomics data preprocessing
  ☆50Updated last month
• OrgMassSpec / OrgMassSpecR
  Organic/biological mass spectrometry data analysis (development version).
  ☆30Updated 7 years ago
• zmahnoor14 / MAW
  Metabolome Annotation Workflow
  ☆25Updated last year
• oloBion / Retip
  Retip - Retention Time prediction for metabolomics
  ☆33Updated last year
• stanstrup / commonMZ
  A collection of common mz values found in mass spectrometry.
  ☆20Updated last year
• eMetaboHUB / MS-CleanR
  ☆25Updated last year
• cbroeckl / RAMClustR
  Assigning precursor-product ion relationships in indiscriminant MS/MS data
  ☆14Updated this week
• RASpicer / MetabolomicsTools
  ☆55Updated 4 years ago
• sneumann / CAMERA
  This is the git repository matching the Bioconductor package CAMERA: Collection of annotation related methods for mass spectrometry data
  ☆11Updated 2 months ago
• ipb-halle / MetFragR
  R package for MetFrag
  ☆24Updated 7 years ago
• wkumler / RaMS
  R-based access to Mass-Spectrometry data
  ☆24Updated 6 months ago
• fgcz / rawrr
  Access Orbitrap data in R lang using C# .NET assembly - bioconductor package
  ☆57Updated last week
• MatteoLacki / timsr
  TimsR: Easy access to timsTOF Pro data from R.
  ☆10Updated 4 years ago
• shuzhao-li / mummichog
  pathway and network analysis for metabolomics
  ☆41Updated last year
• HUPO-PSI / mzTab
  mzTab Reporting MS-based Proteomics and Metabolomics Results
  ☆42Updated 3 months ago
• jorainer / metabolomics2018
  Workshop illustrating mass spectrometry data analysis in R and use of the updated xcms functionality for the preprocessing of LC-MS data.
  ☆28Updated 2 years ago
• computational-metabolomics / msPurity
  A Bioconductor R package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics
  ☆16Updated last year
• zamboni-lab / SLAW
  Scalable and self-optimizing processing workflow for untargeted LC-MS
  ☆28Updated 11 months ago
• antonvsdata / notame
  An R package for non-targeted LC-MS metabolomics
  ☆18Updated 10 months ago
• LiChenPU / NetID
  A global network optimization approach for untargeted LC-MS metabolomics data annotation and metabolite discovery
  ☆46Updated last year
• iomega / ms2query
  MS2Query - machine learning assisted library querying of MS/MS spectra
  ☆45Updated last month
• dosorio / Peptides
  An R package to calculate indices and theoretical physicochemical properties of peptides and protein sequences.
  ☆88Updated last year
• ZhuMSLab / DecoMetDIA
  ☆11Updated 3 years ago
• CCMS-UCSD / GNPS_Workflows
  Public Workflows at GNPS
  ☆61Updated last year
• pattilab / DecoID
  Metabolomics software for database-assisted deconvolution of MS/MS spectra
  ☆19Updated last year
• kevinkovalchik / RawTools
  RawTools is an open-source and freely available package designed to perform scan data parsing and quantification, and quality control ana…
  ☆64Updated 2 years ago
• YuanyueLi / MSEntropy
  Spectral entropy for mass spectrometry data.
  ☆29Updated 4 months ago
• barupal / ChemRICH
  Chemical Similarity Enrichment analysis of metabolomics datasets
  ☆29Updated 11 months ago
• HuanLab / BUDDY
  Bottom-up MS/MS interrogation & Experiment-specific global annotation
  ☆28Updated 6 months ago