Tokenizers and Machine Learning Models for biological sequence data
☆24Sep 27, 2024Updated 2 years ago
Alternatives and similar repositories for bioseq
Users that are interested in bioseq are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆14Oct 14, 2020Updated 6 years ago
- ☆12Sep 7, 2019Updated 7 years ago
- ☆14Jan 31, 2020Updated 6 years ago
- ☆63Sep 15, 2025Updated last year
- ☆13Jan 23, 2020Updated 6 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Fast and memory-efficient clustering + coreset construction, including fast distance kernels for Bregman and f-divergences.☆33Sep 6, 2023Updated 3 years ago
- VariantStore: A Large-Scale Genomic Variant Search Index☆40Jul 9, 2021Updated 5 years ago
- Deep learning model to predict degron sequences☆19Feb 24, 2023Updated 3 years ago
- DartMinHash: Fast Sketching for Weighted Sets☆12Dec 8, 2025Updated 10 months ago
- Reference implementations of minimizer schemes to go with the mod-minimizers paper.☆29Jul 12, 2026Updated 3 months ago
- MetaDome is aimed at professionals in the (bio-)medical field of human genetics who wish to visualize the position of their variant of in…☆11Oct 23, 2026Updated 2 weeks ago
- Barcoded Molecular Families☆22Nov 20, 2017Updated 8 years ago
- BlockPolish: accurate polishing of long-read assembly via block divide-and-conquer☆17Jun 15, 2023Updated 3 years ago
- ☆11Dec 7, 2022Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆29Oct 4, 2022Updated 4 years ago
- ☆10Jun 16, 2022Updated 4 years ago
- Category-wide association study (CWAS) (Werling et al., 2018; An et al., 2018)☆11Apr 5, 2026Updated 7 months ago
- A package for uncertainty estimation with PyTorch☆12Aug 26, 2021Updated 5 years ago
- The fantabulous HMM compiler☆11Oct 18, 2026Updated 2 weeks ago
- Wavelet tree based on a fixed block boosting technique☆17May 18, 2021Updated 5 years ago
- Supplementary datasets and scripts for the METL manuscript☆10Sep 18, 2025Updated last year
- Minhash and maxhash library in Python, combining flexibility, expressivity, and performance.☆21Dec 14, 2024Updated last year
- a toolset for efficient analysis of 10X Genomics linked read data sets, in particular for de novo assembly☆15Nov 27, 2019Updated 6 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- An R package to process and analyze transcriptomic data☆19Jun 18, 2025Updated last year
- Repository for modeling PRO-cap data with the BPNet-like model, ProCapNet.☆23Oct 4, 2026Updated last month
- Program for finding horizontal gene transfer using BLAST result☆11May 26, 2023Updated 3 years ago
- A unified interface for training, sampling, and guiding protein design models.☆16Jul 17, 2026Updated 3 months ago
- multiPhATE with comparative genomics☆18Jun 26, 2026Updated 4 months ago
- Generative antibody language models for framework-conditioned CDR design, scoring, and preference-based alignment.☆15Oct 25, 2026Updated last week
- C++ Implementations of sketch data structures with SIMD Parallelism, including Python bindings☆156Oct 23, 2026Updated 2 weeks ago
- Implementation for sGLMM (Sparse graph-structured linear mixed model)☆15Feb 13, 2023Updated 3 years ago
- A versatile pairwise aligner for genomic and spliced nucleotide sequences☆10Dec 21, 2022Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Identification of NBS-LRR genes in genomic sequence☆11Mar 30, 2022Updated 4 years ago
- simple and not slow ORF caller☆24Apr 7, 2026Updated 7 months ago
- re-assembly and analysis of the Marine Microbial Eukaryotic Transcriptome Sequencing Project☆14Sep 18, 2018Updated 8 years ago
- ☆10Jun 16, 2021Updated 5 years ago
- Hail을 이용한 전장유전체 분석 기초 실습 (2022, Colab 버전 포함)☆15Oct 20, 2022Updated 4 years ago
- ☆19Aug 18, 2020Updated 6 years ago
- A conda-smithy repository for clangdev.☆11Oct 30, 2026Updated last week