djwooten / synergyLinks
Python library for calculting synergy of drug combinations using several drug synergy frameworks
☆36Updated 9 months ago
Alternatives and similar repositories for synergy
Users that are interested in synergy are comparing it to the libraries listed below
Sorting:
- Python generic modular semi-automated platform containing functions for the classification of proteins based on their physicochemical pro…☆32Updated last year
- Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity☆72Updated 2 years ago
- Python package and command line tool for epitope prediction☆51Updated last year
- python tools for TCR:peptide-MHC modeling and analysis☆80Updated last year
- Pipeline for assessing the tractability of potential targets (starting from Gene IDs)☆24Updated 6 months ago
- scripts and facilities for in-silico mutagenesis with FoldX☆57Updated 3 weeks ago
- DeePhase predictor of homotypic liquid-liquid phase separation of proteins & the code associated with the paper "Learning the molecular g…☆16Updated 3 years ago
- Python package for investigating the structural context of PTMs☆28Updated 7 months ago
- StarGazer is a tool designed for rapidly assessing drug repositioning opportunities. It combines multi-source, multi-omics data with a no…☆35Updated last year
- STAPLER (Shared TCR And Peptide Language bidirectional Encoder Representations from transformers) is a language model that uses a joint T…☆28Updated 3 months ago
- PyTorch implementation of bimodal neural networks for drug-cell (pharmarcogenomics) and drug-protein (proteochemometrics) interaction pre…☆52Updated this week
- Fast AlphaFold-Multimer based pipeline for Protein-Protein Interaction (PPI) screening☆39Updated 10 months ago
- Set of useful HADDOCK utility scripts☆53Updated 11 months ago
- A deep learning framework for high-throughput mechanism-driven phenotype screening☆50Updated 4 years ago
- ☆18Updated 2 years ago
- ☆25Updated last year
- Neural networks for deep mutational scanning data☆69Updated 2 months ago
- VDJ assignment and antibody sequence annotation. Scalable from a single sequence to billions of sequences.☆42Updated this week
- ☆40Updated 3 years ago
- ☆17Updated 10 months ago
- An ultra-high-performance protein-protein docking for heterogeneous supercomputers☆63Updated last year
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆90Updated last year
- TCR validated database☆35Updated 3 months ago
- A collection of available Python tools for Proteomics analysis☆58Updated 6 years ago
- pqsar2cpd is a deep learning algorithm for translation of activity profiles into novel molecules.☆30Updated 2 years ago
- ☆26Updated 7 months ago
- ☆41Updated 4 months ago
- ECCpy is a program for EC50 calculation in python.☆44Updated 2 years ago
- iFeatureOmega is a comprehensive platform for generating, analyzing and visualizing more than 170 representations for biological sequence…☆34Updated last year
- Download pdb/protein structures using Uniprot id; This script will download related PDB files, extract chains(Optional), remove duplicate…☆42Updated last year