wikipathways / pywikipathways
Python Client Package for WikiPathways
☆18Updated 4 months ago
Alternatives and similar repositories for pywikipathways:
Users that are interested in pywikipathways are comparing it to the libraries listed below
- Shiny app to easily create publishable plots for scientific papers☆27Updated last week
- Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)☆27Updated 2 years ago
- A bioinformatics best-practice analysis pipeline for epitope prediction and annotation☆42Updated this week
- A deep-learning based multi-modal data integration suite that aims to achieve synesis in a flexible manner☆32Updated this week
- Pipeline for assessing the tractability of potential targets (starting from Gene IDs)☆21Updated last week
- ClinVar Mapping and Annotation Toolkit☆19Updated this week
- bioinformatics plotting and tools☆55Updated 8 months ago
- Project Manager for NGS data analysis☆29Updated 2 years ago
- ☆25Updated 3 months ago
- Transcription Factor Binding Prediction from ATAC-seq and scATAC-seq with Deep Neural Networks☆27Updated last week
- Tools related to the Genomics of Drug Sensitivity in Cancer (GDSC) projects (http://www.cancerrxgene.org/ )☆35Updated 3 years ago
- Visualization and analysis platform for metabolic data and network pattern recognition☆39Updated 2 months ago
- CMap Notebooks for LINCS 2020 Workshop☆46Updated 3 years ago
- A project for exploring differentially active signaling paths related to proteomics datasets☆40Updated 3 months ago
- Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity☆65Updated last year
- Imputing proteomics data using deep learning models☆21Updated this week
- Absolve antibody variable domain sequence analysis☆16Updated 6 years ago
- Initial recommendations for performing, benchmarking, and reporting single-cell proteomics experiments. The code is distributed under an …☆10Updated last year
- Knowledge-primed neural networks☆35Updated last year
- python client for reactome content, analysis, and human functional protein interactions (FI) services api calls.☆28Updated last year
- A python library for creating simulated regulatory DNA sequences☆38Updated last year
- VDJ assignment and antibody sequence annotation. Scalable from a single sequence to billions of sequences.☆42Updated last week
- Biological Network Integration using Convolutions☆61Updated last year
- ☆37Updated last year
- Epitope immunogenicity prediction through in silico TCR-peptide contact potential profiling.☆24Updated last year
- Analysis platform for large-scale dose-dependent data☆23Updated last week
- Examples for gget (https://github.com/pachterlab/gget).☆30Updated 3 weeks ago
- Shiny app for making and annotating Volcano plots☆22Updated 6 months ago
- HLA-II ligand predictor.☆40Updated last year
- Scripts and datasets to reproduce the experiment of the paper "Exploring non-coding RNA functions with deep learning tools"☆13Updated 3 years ago