Alternatives and similar repositories for devium

Users that are interested in devium are comparing it to the libraries listed below

• goeckslab / isoseq-browser
  ☆13Updated 8 years ago
• parklab / nozzle
  Nozzle is a report generation toolkit for data analysis pipelines implemented in R.
  ☆67Updated 9 years ago
• Victorian-Bioinformatics-Consortium / degust
  Deprecated : Use https://github.com/drpowell/degust
  ☆44Updated 8 years ago
• YuLab-SMU / seqcombo
  Visualization tool for genetic reassortment
  ☆21Updated 2 weeks ago
• epiviz / epiviz
  EpiViz is a scientific information visualization tool for genetic and epigenetic data, used to aid in the exploration and understanding o…
  ☆71Updated 2 years ago
• gschofl / reutils
  Talk to the NCBI EUtils
  ☆22Updated 5 years ago
• mjsull / HapFlow
  Visualise interstrain recombination from environmental samples.
  ☆26Updated 6 years ago
• ejfertig / NSFBiosketch
  R markdown file to extract list of collaborators and affiliations from pubmed for NSF biosketch
  ☆38Updated 8 years ago
• ngsutils / ngsutils
  Tools for next-generation sequencing analysis
  ☆89Updated 6 years ago
• lamortenera / bamsignals
  R package to quickly obtain count vectors from indexed bam files
  ☆15Updated 5 months ago
• phylogeography / SPREADv1
  Spatial Phylogenetic Reconstruction of Evolutionary Dynamics
  ☆20Updated 6 years ago
• joey711 / biom
  Development version of the biom package for R
  ☆24Updated 4 years ago
• COMBINE-lab / wasabi
  Prepare Sailfish and Salmon output for downstream analysis
  ☆42Updated 6 years ago
• mani2012 / BatchQC
  Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.
  ☆35Updated 2 years ago
• ewels / Labrador
  A web based tool to manage and automate the processing of publicly available datasets.
  ☆39Updated 4 years ago
• lindsayrutter / bigPint
  Bioconductor package that makes BIG data pint-sized.
  ☆21Updated last year
• galaxy-genome-annotation / docker-jbrowse
  Docker image of JBrowse Genome Browser
  ☆15Updated 4 years ago
• kkdey / Logolas
  R package for Enrichment Depletion Logos (EDLogos) and String Logos
  ☆27Updated 6 years ago
• nh13 / snakeparse
  Making Snakemake workflows into full-fledged command line tools since 1999.
  ☆51Updated 7 years ago
• pcingola / SnpSift
  ☆38Updated 9 months ago
• twbattaglia / koeken
  A Linear Discriminant Analysis Effect Size (LEfSe) wrapper.
  ☆26Updated 8 years ago
• WilsonSayresLab / BioinformaticsIntroduction
  ☆28Updated 5 years ago
• kkdey / aRchaic
  Exploration, clustering, visualization and classification of DNA damage patterns
  ☆19Updated 4 years ago
• taunometsalu / ClustVis
  ClustVis web tool
  ☆55Updated 5 years ago
• ArtPoon / BioID
  Source files for online resources of Bioinformatics of Infectious Diseases course
  ☆22Updated 5 years ago
• WMBEdmands / MetMSLine
  R functions for automation of biomarker discovery based on processing downstream of large LC-MS datasets from any peak picking software
  ☆10Updated 8 years ago
• ctb / 2019-snakemake-ucdavis
  Intro to workflows for efficient automated data analysis, using snakemake.
  ☆32Updated 6 years ago
• brentp / 450k-analysis-guide
  A Practical (And Opinionated) Guide To Analyzing 450K Data
  ☆35Updated 11 years ago
• price0416 / DEvis
  DEvis: an R package for aggregation and visualization of differential expression data
  ☆20Updated 4 years ago
• FredHutch / microbial-rnaseq
  Analysis of RNAseq data from (host-associated) microbial mixtures
  ☆12Updated 5 years ago