Alternatives and similar repositories for devium

Users that are interested in devium are comparing it to the libraries listed below

• gschofl / reutils
  Talk to the NCBI EUtils
  ☆22Updated 5 years ago
• Victorian-Bioinformatics-Consortium / degust
  Deprecated : Use https://github.com/drpowell/degust
  ☆44Updated 8 years ago
• goeckslab / isoseq-browser
  ☆13Updated 8 years ago
• epiviz / epiviz
  EpiViz is a scientific information visualization tool for genetic and epigenetic data, used to aid in the exploration and understanding o…
  ☆71Updated 2 years ago
• kkdey / aRchaic
  Exploration, clustering, visualization and classification of DNA damage patterns
  ☆19Updated 5 years ago
• kkdey / Logolas
  R package for Enrichment Depletion Logos (EDLogos) and String Logos
  ☆27Updated 7 years ago
• mjsull / HapFlow
  Visualise interstrain recombination from environmental samples.
  ☆26Updated 6 years ago
• YuLab-SMU / seqcombo
  Visualization tool for genetic reassortment
  ☆21Updated 3 months ago
• mani2012 / BatchQC
  Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.
  ☆35Updated 2 years ago
• jlanga / smsk
  Snakemake skeleton - Build workflows with Snakemake
  ☆19Updated last year
• audy / miseq-16S-pipeline
  HPC pipeline for overlapping V4 16S rRNA reads generated on Illumina MiSeq
  ☆11Updated 10 years ago
• SchlossLab / schtools
  Schloss Lab Tools for Reproducible Microbiome Research 💩
  ☆31Updated 2 years ago
• parklab / nozzle
  Nozzle is a report generation toolkit for data analysis pipelines implemented in R.
  ☆67Updated 9 years ago
• galaxy-genome-annotation / docker-jbrowse
  Docker image of JBrowse Genome Browser
  ☆15Updated 4 years ago
• JoseBlanca / seq_crumbs
  Little sequence file utilities meant to work within Unix pipelines
  ☆37Updated 11 years ago
• blab / zika-seq
  Pipelines to do MinION sequencing of Zika virus
  ☆15Updated 6 years ago
• brentp / 450k-analysis-guide
  A Practical (And Opinionated) Guide To Analyzing 450K Data
  ☆35Updated 11 years ago
• YuLab-SMU / ggtreeDendro
  Drawing 'dendrogram' using 'ggtree'
  ☆13Updated 3 months ago
• joey711 / biom
  Development version of the biom package for R
  ☆24Updated 4 years ago
• 5c077 / ExpressionDB
  Application for hosting gene expression and ontology data with Shiny
  ☆17Updated 8 years ago
• ewels / Labrador
  A web based tool to manage and automate the processing of publicly available datasets.
  ☆39Updated 4 years ago
• ejfertig / NSFBiosketch
  R markdown file to extract list of collaborators and affiliations from pubmed for NSF biosketch
  ☆38Updated 8 years ago
• friend1ws / pmsignature
  R package for extracting mutation signatures from a list of somatic mutations
  ☆37Updated 6 years ago
• tseemann / homebrew-bioinformatics-linux
  Homebrew formulae for bioinformatics software only available for Linux
  ☆27Updated 6 years ago
• OSS-Lab / MetQy
  Repository for R package MetQy (read related publication here: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6247936/)
  ☆18Updated 4 years ago
• apierleoni / BioGraPy
  Biological Graphic tool in Python
  ☆34Updated 5 years ago
• evoldoers / wtfgenes
  What's The Function of these genes?
  ☆22Updated 8 years ago
• katholt / plotTree
  ☆68Updated 9 years ago
• ngs-docs / angus
  Materials for Analyzing Next-Generation Sequencing (ANGUS) course.
  ☆108Updated 3 years ago
• nh13 / snakeparse
  Making Snakemake workflows into full-fledged command line tools since 1999.
  ☆51Updated 7 years ago