Metagenomic pipeline managed by snakemake
☆18Sep 18, 2024Updated last year
Alternatives and similar repositories for MEDUSA
Users that are interested in MEDUSA are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- An R package for displaying binary trees, aiming to represent multiple layers of information on dendrogram leaves.☆15Feb 18, 2026Updated last month
- Hands-on training on the latest methodologies and applications for the analysis of nucleic acids from eukaryotic single cells☆17Jul 26, 2024Updated last year
- Esse repositório investiga qual o impacto do novo regulamento da UFRN sobre os alunos aplicando o novo cálculo sob antigas matrículas de …☆11Jul 6, 2023Updated 2 years ago
- A pipeline for taxonomic classification and functional annotation of metagenomic reads. Based on MEDUSA☆14Apr 16, 2025Updated 11 months ago
- A companion for the Cromwell Server☆20Mar 19, 2026Updated last week
- NordVPN Special Discount Offer • AdSave on top-rated NordVPN 1 or 2-year plans with secure browsing, privacy protection, and support for for all major platforms.
- ☆12Apr 5, 2021Updated 4 years ago
- GitHub template repository for creating new barebones Nextflow pipelines, using the Arcadia-Science/nextflow-template cookiecutter templa…☆13Mar 21, 2023Updated 3 years ago
- A MLOps workflow to classify incomes based on publicly available Census Bureau data.☆37Mar 28, 2022Updated 4 years ago
- Static website for the PH4AGE alliance☆13Oct 27, 2023Updated 2 years ago
- biochem4j: integrated and extensible biochemical knowledge through graph databases☆12Apr 12, 2018Updated 7 years ago
- ☆10Feb 28, 2018Updated 8 years ago
- This is a repository for a machine learning supplementary course to EEC1509, which is a graduate course offered by PPgEEC/UFRN.☆22Apr 28, 2023Updated 2 years ago
- renders a KEGGML file and displays a KEGG pathway☆10Jul 14, 2016Updated 9 years ago
- Tool for visualising viral lineages in space and time. As seen on covid19.sanger.ac.uk and covglobe.org.☆10Jul 22, 2022Updated 3 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Analysis of metagenomic shotgun sequences including assembly, speciation, ARG discovery and more☆36May 1, 2023Updated 2 years ago
- A snakemake workflow for metagenomic projects☆15Feb 16, 2023Updated 3 years ago
- Differential gene expression analysis on RNA-seq data☆13Apr 26, 2024Updated last year
- Tutorial de primeiros passos com GIT e Github!☆17Feb 21, 2019Updated 7 years ago
- This R package is used to calculate CO2 and CH4 gas fluxes measured with static chamber method. It provide a easy way to calculate multip…☆10May 20, 2021Updated 4 years ago
- Zero-Configuration Applause/Claps/Kudos Button for R Markdown and Shiny apps☆13Nov 4, 2021Updated 4 years ago
- ☆16May 21, 2024Updated last year
- Statistical Computing☆11Jan 24, 2025Updated last year
- Flexible analysis of high-content CRISPR screening☆32Mar 6, 2026Updated 3 weeks ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- Pretty, simple, optionally interactive plots for bioinformatics analysis pipelines☆14Mar 1, 2023Updated 3 years ago
- ☆20Oct 26, 2023Updated 2 years ago
- Repository of sequences to annotate hydrocarbon-degrading genes/proteins from genomes/metagenomes☆12May 10, 2024Updated last year
- hAMRoaster is an analysis pipeline that can compare the output of tools for detecting AMR genes and provide metrics of their performance☆22Mar 8, 2024Updated 2 years ago
- scRNA analysis of public dataset on bladder cancer☆20Dec 12, 2025Updated 3 months ago
- A wrapper around the sleepwalk package that allows for interactive knn visualizations of an embedding.☆22May 8, 2024Updated last year
- ☆24Feb 25, 2026Updated last month
- Trabalho da 1 unidade da disciplina de Ciencia de dados I.☆34Sep 24, 2018Updated 7 years ago
- Working with the outputs of sourmash in R☆28Jan 15, 2026Updated 2 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Fast, accurate taxonomic assignments for the human vaginal microbiota☆11Mar 19, 2026Updated last week
- ☆13Sep 20, 2024Updated last year
- Repository for IMD1114, an undergraduate course about Deep Learning☆10Sep 19, 2025Updated 6 months ago
- Algorithm to divide a phylogenetic tree into segments based on phenotypes at the leaves of the tree☆25Jul 13, 2018Updated 7 years ago
- Survival analysis on gene expression (RNA-seq) in bladder cancer TCGA data☆24Apr 26, 2024Updated last year
- Snakemake pipeline for benchmarking cell-type deconvolution methods and deconvolving real bulk RNA-seq data with the use of scRNA-seq dat…☆15Apr 28, 2025Updated 11 months ago
- Feature selection for preserving biological trajectories in single-cell data☆21May 29, 2025Updated 10 months ago