shuzhao-li / mummichogLinks
pathway and network analysis for metabolomics
☆42Updated last year
Alternatives and similar repositories for mummichog
Users that are interested in mummichog are comparing it to the libraries listed below
Sorting:
- ☆55Updated 4 years ago
- A global network optimization approach for untargeted LC-MS metabolomics data annotation and metabolite discovery☆47Updated 2 years ago
- Workshop illustrating mass spectrometry data analysis in R and use of the updated xcms functionality for the preprocessing of LC-MS data.☆28Updated 2 years ago
- ☆25Updated last year
- R package for optimized LC-MS spectra processing☆25Updated last month
- MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters☆27Updated 7 years ago
- asari, metabolomics data preprocessing☆53Updated last month
- ☆11Updated 3 years ago
- Pre-processing of mass spectrometry-based metabolomics data with quantification and identification based on MS1 and MS2 data.☆23Updated 3 months ago
- ☆65Updated last year
- Hierarchical orderings for mass spectrometry data. Canonically pronounced "chemis-tree".☆30Updated 2 years ago
- Assigning precursor-product ion relationships in indiscriminant MS/MS data☆14Updated last week
- Chemical Similarity Enrichment analysis of metabolomics datasets☆29Updated last year
- R package for functionally scoring phosphorylation sites☆21Updated 5 years ago
- Metabolome Annotation Workflow☆25Updated last year
- A collection of common mz values found in mass spectrometry.☆20Updated last year
- A set of metabolomics tools for use in Galaxy☆11Updated 3 years ago
- mzTab Reporting MS-based Proteomics and Metabolomics Results☆44Updated 5 months ago
- TimsR: Easy access to timsTOF Pro data from R.☆12Updated 4 years ago
- A Python interface to proteomics data repositories☆35Updated 3 months ago
- GLEAMS is a Learned Embedding for Annotating Mass Spectra.☆26Updated 2 years ago
- Core Utils for Mass Spectrometry Data☆17Updated 5 months ago
- Untargeted metabolomics workflow for large-scale data processing and analysis implemented in Snakemake☆27Updated 8 months ago
- The pmartR R package provides functionality for quality control, normalization, exploratory data analysis, and statistical analysis of ma…☆46Updated last month
- Docker for MetaboAnalyst 4.0☆24Updated 4 years ago
- A Bioconductor R package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics☆16Updated last year
- MetNormalizer is used to normalize large scale metabolomics data.☆22Updated 4 years ago
- Visualizing and Analyzing Mass Spectrometry Related Data in Proteomics☆11Updated 3 months ago
- Workflow solutions for mass-spectrometry based non-target analysis.☆67Updated this week
- 5-day workshop on Metabolomics and Data Analysis☆16Updated 6 years ago