sgmiriuka / PSC_differentiation
Applying deep learning for very early recognition of pluripotent stem cell differentiation
☆10Updated 6 years ago
Alternatives and similar repositories for PSC_differentiation:
Users that are interested in PSC_differentiation are comparing it to the libraries listed below
- Analysis of results of the Data Science Bowl 2018☆21Updated 4 years ago
- Notebooks for VoidSeg☆16Updated 5 years ago
- Hough CNN implementation - new implementation from scratch - based on pre-existing V-Net code.☆12Updated 8 years ago
- 3D virtual staining with 2D and 2.5D U-Nets☆29Updated last year
- czi reader from https://www.lfd.uci.edu/~gohlke/code/czifile.py.html☆15Updated 6 years ago
- Data processing tools associated with deepcell☆11Updated last year
- Ideas, code and results of the 2018 CytoData hackathon☆11Updated last year
- AICS ML Segmentation (One-Way) Mirror☆27Updated 4 years ago
- imaging demos☆9Updated 2 years ago
- Python package to export tensorflow models as DeepImageJ bundled models☆17Updated 2 years ago
- Integrated Cell project implemented in pytorch☆44Updated last year
- A Deep Architecture for Synapse Detection in Multiplexed Fluorescence Images☆14Updated 5 years ago
- a toolbox for manipulation of digital pathology slides and annotations☆19Updated 4 years ago
- ☆25Updated 4 years ago
- a free, open-source web app for annotating, training, and evaluating image understanding algorithms☆25Updated 3 years ago
- ☆12Updated 4 years ago
- ☆40Updated 5 years ago
- Quantitative analysis of cell motility behaviors☆13Updated 2 months ago
- ☆49Updated 6 years ago
- ☆46Updated 6 years ago
- The U-Net Segmentation plugin for Fiji (ImageJ)☆86Updated 2 years ago
- Lazily load multiscale whole-slide images with openslide and dask☆33Updated 2 years ago
- Deep convolutional neural networks for biological motion analysis☆14Updated 6 years ago
- Affine and Regularized DEformative Numeric Transform (ardent) is a Python package for performing image registration using LDDMM.☆17Updated 4 years ago
- U-net based segmentation of nuclei in microscopy images☆52Updated 6 years ago
- ☆15Updated 5 years ago
- Automatic segmentation of electron microscopy volumes☆31Updated 12 years ago
- A highly configurable toolkit for training 3D/2D CNNs and general Neural Networks (superceded by https://github.com/ELEKTRONN/elektronn3)☆38Updated 3 years ago
- Prototype implementation of napari-integrated CNN training viewer☆14Updated 4 months ago
- A general illumination correction method for optical microscopy.☆41Updated 3 years ago