MorphoDiff is a diffusion based generative pipeline to predict high-resolution cell morphological responses under different conditions based on perturbation encoding.
☆33Mar 20, 2026Updated 3 months ago
Alternatives and similar repositories for MorphoDiff
Users that are interested in MorphoDiff are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Official implementation of "CellFlux: Simulating Cellular Morphology Changes via Flow Matching" (ICML 2025)☆41Sep 3, 2025Updated 9 months ago
- Swift Phenotypic Analysis of Cells☆10Jun 8, 2025Updated last year
- Modeling complex perturbations with CellFlow☆148Jun 22, 2026Updated last week
- Evaluating batch correction methods for image-based cell profiling☆15Aug 11, 2025Updated 10 months ago
- High-Dimensional Gene Expression and Morphology Profiles of Cells across 28,000 Genetic and Chemical Perturbations☆55Aug 11, 2025Updated 10 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Predicting assays Using Morphological Analysis☆14May 24, 2024Updated 2 years ago
- Image-based Profiling Handbook☆11Apr 15, 2025Updated last year
- Compendium of tools for the Imaging Platform☆16Jun 12, 2026Updated 2 weeks ago
- cell type specific, trait-associated gene regulation☆30Mar 31, 2025Updated last year
- ☆28Apr 15, 2026Updated 2 months ago
- Cell Painting Gallery☆131Jun 8, 2026Updated 3 weeks ago
- Harmonize high-content image analysis tool outputs for processing with Pycytominer and other Cytomining tools.☆20Jun 23, 2026Updated last week
- Code used to analyze datasets and generate figures from Williams et al., 2021☆16Jun 29, 2021Updated 5 years ago
- Paper collection about de novo peptide Sequening☆24Feb 5, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Processed Cell Painting Data for the LINCS Drug Repurposing Project☆34Aug 4, 2022Updated 3 years ago
- DRUG (Digital RNA with pertUrbation of Genes)-seq data analysis pipeline☆35Mar 19, 2025Updated last year
- DeepSpot: Deep learning model for predicting spatial transcriptomics from H&E histopathology images. Supports spot-level (Visium) and sin…☆80Jun 8, 2026Updated 3 weeks ago
- A novel method named stDiff investigates the potential of employing diffusion models for single-cell omics generation.☆26Mar 13, 2024Updated 2 years ago
- parallel differential expression for single-cell perturbation sequencing☆25Updated this week
- Python package to interactively annotate histological images within a jupyter notebook☆18Oct 20, 2025Updated 8 months ago
- Awesome list of tools and methods to perform spatial transcriptomic data analysis.☆49Aug 7, 2021Updated 4 years ago
- ☆72Feb 14, 2025Updated last year
- Morphological features from images and masks made easy.☆48Jun 22, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A python package for Multiomics and Ecological Spatial Analysis (MESA)☆25Apr 8, 2025Updated last year
- ☆26May 26, 2026Updated last month
- Spatial omics analysis and visualization library☆25Jun 22, 2026Updated last week
- ☆22Apr 30, 2025Updated last year
- Classification of White Blood Cells in Peripheral Smear Images☆18Apr 28, 2022Updated 4 years ago
- Convert MSP files into a database☆10May 4, 2021Updated 5 years ago
- Genomic Features in Python from BioConductor's AnnotationHub☆23Jun 22, 2026Updated last week
- ☆176Jan 30, 2026Updated 5 months ago
- Weakly supervised learning uncovers phenotypic signatures in single-cell data☆41Jun 7, 2026Updated 3 weeks ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- This repository contains the all my ML KIT projects using flutter.☆14Oct 10, 2022Updated 3 years ago
- End-to-end model for cell segmentation and classification☆23Jan 13, 2025Updated last year
- [MICCAI'25] LesionDiffusion, a general, text-controllable lesion synthesis foundation model for 3D CT imaging.☆20Jan 19, 2026Updated 5 months ago
- R/Bioconductor package to interactively explore single cell clusters at multiple resolutions☆11Mar 10, 2022Updated 4 years ago
- ☆40Feb 24, 2026Updated 4 months ago
- pseudobulking on an AnnData object☆37Jun 17, 2026Updated last week
- ☆23Jul 14, 2025Updated 11 months ago