bowang-lab / MorphoDiffLinks
MorphoDiff is a diffusion based generative pipeline to predict high-resolution cell morphological responses under different conditions based on perturbation encoding.
☆18Updated 2 months ago
Alternatives and similar repositories for MorphoDiff
Users that are interested in MorphoDiff are comparing it to the libraries listed below
Sorting:
- ☆41Updated 3 years ago
- ☆67Updated 3 weeks ago
- The Single-Cell Pathology Landscape of Breast Cancer☆26Updated 5 years ago
- Spatially Resolved Gene Expression Prediction from H&E Histology Images via Bi-modal Contrastive Learning☆77Updated 7 months ago
- A vision language model for gigapixel whole slide images in histopathology☆64Updated 8 months ago
- Machine learning for Analysis of Proteomics in Spatial biology - Nature Communications☆56Updated last year
- Joint variational Autoencoders for Multimodal Imputation and Embedding (JAMIE)☆28Updated 2 months ago
- ☆28Updated 2 years ago
- DeepSpot: Leveraging Spatial Context for Enhanced Spatial Transcriptomics Prediction from H&E Images☆46Updated 3 weeks ago
- Hibou: Foundational Models for Pathology☆72Updated 7 months ago
- SEQUOIA: Digital profiling of cancer transcriptomes with grouped vision attention☆40Updated this week
- ☆11Updated 2 years ago
- Self-supervised representation learning combining GTEx histology, RNA-seq and WGS☆29Updated last month
- Agent self-driven repository on bio-agent papers, i.e. papers on LLM-based agents in biology and medicine.☆42Updated last week
- A Transformer Model Exploiting Histology Images and Spatial Gene Expression☆19Updated 2 months ago
- HCC_Deep_learning☆19Updated 4 years ago
- PyTorch implementation of HisToGene☆40Updated 3 years ago
- ☆30Updated this week
- BEiT-based model Pre-training on Histopathological image☆47Updated 2 months ago
- This repository contains data and other materials related to the DeepPT manuscript☆14Updated last year
- ☆62Updated 3 months ago
- an efficient data integration method for multiple spatial transcriptomics data with non- cluster-relevant effects such as the complex batc…☆10Updated last year
- Deep learning on histopathology images.☆124Updated 3 years ago
- Multi-stain graph self attention multiple instance learning for histopathology Whole Slide Images - BMVC 2023☆13Updated 3 months ago
- Deep learning model for the prediction of microsatellite instability in colorectal cancer: a diagnostic study☆29Updated 4 years ago
- Pytorch implementation of EpiFoundation☆17Updated 3 months ago
- MUSE is a deep learning approach characterizing tissue composition through combined analysis of morphologies and transcriptional states f…☆35Updated 3 years ago
- TCGA Pathology Reports in Machine Readable Text☆46Updated last year
- ☆13Updated last year
- ☆55Updated last year