MorphoDiff is a diffusion based generative pipeline to predict high-resolution cell morphological responses under different conditions based on perturbation encoding.
☆34Mar 20, 2026Updated 6 months ago
Alternatives and similar repositories for MorphoDiff
Users that are interested in MorphoDiff are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Official implementation of "CellFlux: Simulating Cellular Morphology Changes via Flow Matching" (ICML 2025)☆43Sep 3, 2025Updated last year
- A Python package for unsupervised analysis of spatial (prote)omics data.☆19Jul 23, 2026Updated last month
- High-Dimensional Gene Expression and Morphology Profiles of Cells across 28,000 Genetic and Chemical Perturbations☆56Aug 11, 2025Updated last year
- Cell Painting Gallery☆140Sep 8, 2026Updated last week
- A novel method named stDiff investigates the potential of employing diffusion models for single-cell omics generation.☆27Mar 13, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Processed Cell Painting Data for the LINCS Drug Repurposing Project☆37Aug 4, 2022Updated 4 years ago
- Morphological features from images and masks made easy.☆50Updated this week
- ☆27Jan 10, 2025Updated last year
- DRUG (Digital RNA with pertUrbation of Genes)-seq data analysis pipeline☆36Mar 19, 2025Updated last year
- Image-based Profiling Handbook☆11Updated this week
- ☆15Aug 9, 2023Updated 3 years ago
- Swift Phenotypic Analysis of Cells☆10Jun 8, 2025Updated last year
- Modeling complex perturbations with CellFlow☆159Updated this week
- Evaluating batch correction methods for image-based cell profiling☆16Aug 11, 2025Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Predicting assays Using Morphological Analysis☆14May 24, 2024Updated 2 years ago
- PDD: Awesome Phenotypic Drug Discovery☆41Oct 17, 2025Updated 11 months ago
- Compendium of tools for the Imaging Platform☆16Aug 20, 2026Updated last month
- Codebase for training the SubCell models☆24Updated this week
- cell type specific, trait-associated gene regulation☆31Sep 8, 2026Updated last week
- This R package for performing module repertoire analyses and generating fingerprint representations☆19Sep 16, 2021Updated 5 years ago
- A human universal senescence index to evaluate celluar senescence☆44Sep 11, 2025Updated last year
- Code used to analyze datasets and generate figures from Williams et al., 2021☆16Jun 29, 2021Updated 5 years ago
- Classification of White Blood Cells in Peripheral Smear Images☆19Apr 28, 2022Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- C++ 聊天项目实战案例,涵盖grpc,并发线程,网络编程,qt开发,数据库等多种技术综合应用☆12Aug 23, 2026Updated 3 weeks ago
- LLM-Driven Multi-Agent Framework for Automated scRNA-Seq Data Analysis:The LLM-driven multi-agent framework for single-cell RNA sequencin…☆18Jun 11, 2026Updated 3 months ago
- Bencharking pipeline for evaluating Transcriptomic representations for perturbation tasks☆16Nov 5, 2024Updated last year
- pytorch dataloaders for single-cell perturbation data☆54Jul 18, 2026Updated 2 months ago
- Python package for image-based profiling☆145Updated this week
- ☆18Oct 22, 2025Updated 10 months ago
- scPRAM accurately predicts single-cell gene expression perturbation response based on attention mechanism☆19Oct 17, 2024Updated last year
- Notebooks for generating figures in "Progressive Plasticity During Colorectal Cancer Metastasis"☆23Dec 1, 2024Updated last year
- parallel differential expression for single-cell perturbation sequencing☆31Aug 26, 2026Updated 3 weeks ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Comprehensive suite for evaluating perturbation prediction models☆160Jul 27, 2026Updated last month
- Relative Expression Ordering Analysis (REOA) package☆21Nov 12, 2022Updated 3 years ago
- ☆18May 14, 2025Updated last year
- MaskTextspotterv3应用于中文数据集☆14Aug 28, 2021Updated 5 years ago
- Python package to interactively annotate histological images within a jupyter notebook☆19Oct 20, 2025Updated 11 months ago
- The Agentic BioML Challenge + AutoBioML framework☆18Jun 3, 2025Updated last year
- Awesome list of tools and methods to perform spatial transcriptomic data analysis.☆49Aug 7, 2021Updated 5 years ago