Pilot to work with dynamic visualization by using python
☆59Mar 26, 2020Updated 6 years ago
Alternatives and similar repositories for Pynteractive
Users that are interested in Pynteractive are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Sequence Bloom Trees with All/Some split☆11Oct 30, 2018Updated 7 years ago
- dynamic-updateable-index☆11Nov 10, 2015Updated 10 years ago
- Python CLI for alignment-free genomics.☆13Feb 11, 2026Updated last month
- A post-processing tool to reclassify Kraken 2 output based on the confidence score and/or minimum minimizer hit groups.☆10Nov 10, 2025Updated 4 months ago
- Classify sequencing reads using MinHash.☆48Apr 6, 2020Updated 5 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Streamable FASTA parser.☆14Nov 19, 2019Updated 6 years ago
- Split Kmer Analysis☆66May 26, 2022Updated 3 years ago
- Source code for the program MavericK, described fully at www.bobverity.com/maverick☆12Jun 21, 2018Updated 7 years ago
- Bloom filter implementation in Nimrod☆16May 26, 2023Updated 2 years ago
- ☆16Oct 2, 2019Updated 6 years ago
- Metagenomic profiling and phylogenetic distances via common kmers☆42Jul 12, 2021Updated 4 years ago
- Nanopore read de-multiplexer☆13Mar 25, 2020Updated 6 years ago
- ☆15Jun 27, 2024Updated last year
- A set of scripts for the assembly of chloroplast genomes out of whole-genome sequencing reads☆12May 2, 2019Updated 6 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Hagfish - assess an assembly through creative use of coverage plots☆36Aug 9, 2012Updated 13 years ago
- Analysis and Visualization of Ribosome Profiling Data☆12Dec 14, 2019Updated 6 years ago
- Automatically exported from code.google.com/p/qsimscan☆14Oct 10, 2021Updated 4 years ago
- An example of a data analysis pipeline using Make☆17Jul 26, 2016Updated 9 years ago
- Tools and utilities for making use of mastiff☆12Mar 10, 2023Updated 3 years ago
- Rails application for storing and parsing clinical exome VCF files. Gene annotations can be retrieved via Biomart integration from Ensemb…☆10May 7, 2017Updated 8 years ago
- Parse samtools pileup file to get how many bases and what kind of bases are called☆14Apr 30, 2024Updated last year
- µbinfie blog☆19Jul 21, 2025Updated 8 months ago
- ☆16Jul 16, 2016Updated 9 years ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Using kallisto for metagenomic analysis☆49Jan 12, 2017Updated 9 years ago
- Searching large collections of sequencing data with genome-scale queries☆17Feb 5, 2026Updated last month
- Real-time species-typing visualisation for nanopore data.☆13Apr 11, 2023Updated 2 years ago
- Mandrake 🌿/👨🔬🦆 – Fast visualisation of the population structure of pathogens using Stochastic Cluster Embedding☆39Mar 7, 2025Updated last year
- ☆14Jan 20, 2016Updated 10 years ago
- Porting of samtools-ruby to BioRuby. Binder of samtools for ruby, on the top of FFI -from original project-☆34Sep 20, 2019Updated 6 years ago
- ☆20Jan 23, 2019Updated 7 years ago
- Rapid sensitive and accurate read mapping via quasi-mapping☆90Jun 5, 2020Updated 5 years ago
- ☆18Nov 16, 2015Updated 10 years ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Command line interface and Python client library for the One Codex API☆25Updated this week
- Algorithm to divide a phylogenetic tree into segments based on phenotypes at the leaves of the tree☆25Jul 13, 2018Updated 7 years ago
- deBGR: An Efficient and Near-Exact Representation of the Weighted de Bruijn Graph☆31Jan 19, 2021Updated 5 years ago
- ☆10Feb 23, 2024Updated 2 years ago
- Analysis toolkit and programming library for k-mer profiles☆31Mar 11, 2021Updated 5 years ago
- Compilation of a series of resources, readings, and tutorials for getting started in R. This workshop was designed for undergraduate rese …☆11Jul 25, 2025Updated 8 months ago
- Read contamination removal☆25Jan 24, 2024Updated 2 years ago