Pilot to work with dynamic visualization by using python
☆59Mar 26, 2020Updated 6 years ago
Alternatives and similar repositories for Pynteractive
Users that are interested in Pynteractive are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Sequence Bloom Trees with All/Some split☆11Oct 30, 2018Updated 7 years ago
- A post-processing tool to reclassify Kraken 2 output based on the confidence score and/or minimum minimizer hit groups.☆11Nov 10, 2025Updated 9 months ago
- Automated optimisation of de-novo transcriptome assembly☆25Nov 11, 2015Updated 10 years ago
- dynamic-updateable-index☆11Nov 10, 2015Updated 10 years ago
- Python CLI for alignment-free genomics.☆13May 25, 2026Updated 2 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Classify sequencing reads using MinHash.☆48Apr 6, 2020Updated 6 years ago
- Streamable FASTA parser.☆14May 18, 2026Updated 3 months ago
- Split Kmer Analysis☆67May 26, 2022Updated 4 years ago
- ☆16Oct 2, 2019Updated 6 years ago
- Bloom filter implementation in Nimrod☆16May 26, 2023Updated 3 years ago
- Concordance between variant callers☆17Nov 27, 2014Updated 11 years ago
- Source code for the program MavericK, described fully at www.bobverity.com/maverick☆12Jun 21, 2018Updated 8 years ago
- Metagenomic profiling and phylogenetic distances via common kmers☆42Jul 12, 2021Updated 5 years ago
- A set of scripts for the assembly of chloroplast genomes out of whole-genome sequencing reads☆12May 2, 2019Updated 7 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- ☆16May 21, 2026Updated 2 months ago
- Nanopore read de-multiplexer☆13Mar 25, 2020Updated 6 years ago
- Automatically exported from code.google.com/p/qsimscan☆14Oct 10, 2021Updated 4 years ago
- A VCF parser and variant record model in JavaScript.☆22Mar 4, 2017Updated 9 years ago
- An example of a data analysis pipeline using Make☆17Jul 26, 2016Updated 10 years ago
- Software for nanopore data analysis☆29Sep 10, 2014Updated 11 years ago
- Tools and utilities for making use of mastiff☆12Mar 10, 2023Updated 3 years ago
- Parse samtools pileup file to get how many bases and what kind of bases are called☆14Apr 30, 2024Updated 2 years ago
- µbinfie blog☆19Jul 21, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Rails application for storing and parsing clinical exome VCF files. Gene annotations can be retrieved via Biomart integration from Ensemb…☆10May 7, 2017Updated 9 years ago
- Biopsy - the Bioinformatic Optimisation System☆16Nov 1, 2015Updated 10 years ago
- Using kallisto for metagenomic analysis☆49Jan 12, 2017Updated 9 years ago
- ☆16Jul 16, 2016Updated 10 years ago
- Real-time species-typing visualisation for nanopore data.☆12Apr 11, 2023Updated 3 years ago
- Write-once-read-many table for large datasets.☆27Oct 5, 2023Updated 2 years ago
- Mandrake 🌿/👨🔬🦆 – Fast visualisation of the population structure of pathogens using Stochastic Cluster Embedding☆40Aug 7, 2026Updated last week
- An MPI Toolkit for large-scale genomic analysis☆16Feb 29, 2016Updated 10 years ago
- ☆14Jan 20, 2016Updated 10 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- The 3rd incarnation of the Wise package for sequence analysis☆23Jun 19, 2014Updated 12 years ago
- ☆20Jan 23, 2019Updated 7 years ago
- Read contamination removal☆25Jan 24, 2024Updated 2 years ago
- ☆18Nov 16, 2015Updated 10 years ago
- Rapid sensitive and accurate read mapping via quasi-mapping☆90Jun 5, 2020Updated 6 years ago
- deBGR: An Efficient and Near-Exact Representation of the Weighted de Bruijn Graph☆31Jan 19, 2021Updated 5 years ago
- Create and maintain phylogenetic "reference packages" of biological sequences.☆22May 27, 2026Updated 2 months ago