Alignment-free simulation, computation, and visualization of Low-compexity regions in biological data
☆11Sep 3, 2026Updated 2 months ago
Alternatives and similar repositories for alcor
Users that are interested in alcor are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- AltaiR: a C toolkit for alignment-free and temporal analysis of multi-FASTA data☆11Mar 4, 2026Updated 8 months ago
- Machine learning meets natural products☆11Jun 4, 2026Updated 5 months ago
- A tool to find and visualize rearrangements in DNA sequences☆16Sep 16, 2019Updated 7 years ago
- An efficient DNA sequence compressor using Neural Networks☆17Jan 25, 2023Updated 3 years ago
- Reconstruction and analysis of viral and host genomes at multi-organ level☆21Apr 10, 2026Updated 7 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- A tool to infer metagenomic sample composition☆20Oct 10, 2023Updated 3 years ago
- A secure encryption tool for genomic data☆64May 3, 2026Updated 6 months ago
- A web-based platform that allows the building and management of ETL pipelines in a multi-institution environment.☆17Apr 13, 2022Updated 4 years ago
- Find and visualize rearrangements in DNA sequences☆56Jun 3, 2026Updated 5 months ago
- A genomics-proteomics toolkit☆47Oct 18, 2023Updated 3 years ago
- Workflow Management for Biomedical exploration☆30Nov 8, 2018Updated 8 years ago
- Extracting Patients' information from clinical notes and export them to an OMOP CDM database.☆28Jul 14, 2021Updated 5 years ago
- Multiple Bacteria Genome Compressor (MBGC)☆13Aug 29, 2026Updated 2 months ago
- Read, parse and operate different multiple input file formats with OpenVariant☆14Oct 7, 2026Updated last month
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- A filter algorithm with program to filter an alignment or mapping file☆13May 15, 2025Updated last year
- ☆12Feb 14, 2023Updated 3 years ago
- A Generative Pre-Trained Transformer Package for Pangenomes☆53May 19, 2025Updated last year
- A pipeline creation tool using Snakemake☆14Nov 7, 2026Updated last week
- GA4GH cryptographic tools☆25Jun 8, 2026Updated 5 months ago
- Pangenome graph-based genome inference☆15Jul 24, 2025Updated last year
- A command-line interface for MD-Repo service☆10Oct 6, 2026Updated last month
- PAF (pairwise alignment format) validator based on extended CIGAR strings☆15Aug 10, 2025Updated last year
- A Python package to predict enzyme catalytic optimum temperature with machine learning☆10Feb 9, 2021Updated 5 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Error correction of long reads☆16Jan 30, 2026Updated 9 months ago
- Fastq compression tool☆17Dec 2, 2019Updated 6 years ago
- Long-read aligner to pangenome graphs☆29May 20, 2024Updated 2 years ago
- Classes to parse the BRENDA database.☆12Aug 14, 2025Updated last year
- Pytorch version of Continuous Language Generative Flow (ACL 2021)☆11Sep 14, 2021Updated 5 years ago
- Repository☆10Oct 23, 2024Updated 2 years ago
- ☆17Aug 23, 2026Updated 2 months ago
- Longread PacBio sequencing processing for WGS and PureTarget☆16Updated this week
- HAT is a set of tools for calling de novo variants from whole-genome sequencing data.☆24Nov 18, 2025Updated 11 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Fast-SG: An alignment-free algorithm for ultrafast scaffolding graph construction from short or long reads.☆23May 29, 2018Updated 8 years ago
- De novo tandem repeat calling from PacBio HiFi data☆19Oct 1, 2026Updated last month
- a tool to evaluate long-read error correction mainly with PacBio High-Fidelity Reads (HiFi reads).☆20Dec 5, 2023Updated 2 years ago
- CNN Visualization Grad-CAM☆10Aug 5, 2020Updated 6 years ago
- Rust-based bm3d algorithm for ring artifact removal in normalized sinogram with Python Bindings☆13Updated this week
- Given a set of kmers (fasta format) and a set of sequences (fasta format), this tool will extract the sequences containing the kmers.☆21Oct 20, 2023Updated 3 years ago
- A command-line interface for Sentieon pipelines☆17Updated this week
Are these results useful?