cobilab / cryfa
A secure encryption tool for genomic data
☆56Updated 11 months ago
Alternatives and similar repositories for cryfa:
Users that are interested in cryfa are comparing it to the libraries listed below
- Sparse Project VCF: evolution of VCF to encode population genotype matrices efficiently☆58Updated last year
- (WIP) best-practices workflow for rare disease☆60Updated 9 months ago
- parallelized blat with multi-threads support☆53Updated 2 months ago
- ☆31Updated last month
- A method for variant graph genotyping based on exact alignment of k-mers☆86Updated 6 years ago
- A collection of publications on comparison of high-throughput sequencing technologies.☆26Updated 3 months ago
- Fast FASTQ sample demultiplexing in Rust.☆60Updated 2 weeks ago
- RUFUS k-mer based genomic variant detection☆54Updated 2 months ago
- software tool for the manipulation, annotation, selection, and analysis of variants in the context of next-gen sequencing analysis☆31Updated 3 years ago
- NEAT (NExt-generation Analysis Toolkit) simulates next-gen sequencing reads and can learn simulation parameters from real data.☆53Updated last month
- Fast calculations of linkage-disequilibrium in large-scale human cohorts☆43Updated 5 years ago
- Cancer Predisposition Sequencing Reporter (CPSR)☆58Updated last week
- Fast fusion detection using kallisto☆80Updated 5 months ago
- Tools for the analysis of structural variation in genomes☆78Updated last year
- simple bioinformatics command-line (t)ools (i) (w)ished (i) (h)ad.☆44Updated 2 years ago
- TIDDIT - structural variant calling☆74Updated 3 weeks ago
- Bioinformatic Analysis pipeLine for SomAtic Mutations In Cancer☆45Updated this week
- A tool for simulating random mutations in any genome☆38Updated last year
- Functionality for working with pipeline and sample sheet schema files in Nextflow pipelines☆19Updated 2 weeks ago
- Scallop is a reference-based transcriptome assembler for RNA-seq☆90Updated 3 years ago
- A tool for genotyping Variable Number Tandem Repeats (VNTR) from sequence data☆43Updated 3 months ago
- Assembly Based ReAligner☆73Updated 6 years ago
- A bit-packed k-mer representation (and relevant utilities) for rust☆48Updated 9 months ago
- HPG Aligner is an ultrafast and highly sensitive Next-Generation Sequencing (NGS) mapper which supoprts both DNA and RNA alignment☆34Updated 7 years ago
- A simple toolset for BED files (warning: CLI may change before bedtk becomes stable)☆138Updated 10 months ago
- The Modular Aligner and The Modular SV Caller☆46Updated last year
- evaluating vcf parsing libraries☆18Updated 3 years ago
- ☆26Updated 2 years ago
- Scripts, utilities and programs for genomic bioinformatics.☆82Updated last month
- RNA-Seq Mutation Detection☆28Updated 3 years ago