ieeta-pt / DrACLinks
Extracting Patients' information from clinical notes and export them to an OMOP CDM database.
☆27Updated 3 years ago
Alternatives and similar repositories for DrAC
Users that are interested in DrAC are comparing it to the libraries listed below
Sorting:
- A web-based platform that allows the building and management of ETL pipelines in a multi-institution environment.☆17Updated 3 years ago
- Dashboards showing intrinsic meta data for the OMOP-CDM databases in the EHDEN data network☆14Updated last year
- A genomics-proteomics toolkit☆46Updated last year
- Surfacing Semantic Data from Clinical Notes in Electronic Health Records for Tailored Care, Trial Recruitment and Clinical Research☆89Updated 2 years ago
- Public release of the DeepPhe analytic software☆30Updated 2 years ago
- A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.☆80Updated 2 weeks ago
- NLP2FHIR: A FHIR-based Clinical Data Normalization Pipeline and Its Applications☆61Updated 2 years ago
- GenericCDSS is a web-based application, which provides the main dashboard where professionals (e.g, practitioners, nurses) can follow all…☆42Updated 6 years ago
- Distributed, fault tolerant batch processing for Natural Language Applications and Search, using remote partitioning☆43Updated 2 years ago
- General tutorials for the setup and use of MedCAT.☆37Updated 2 weeks ago
- A near real-time named-entity recognizer☆60Updated last year
- [in development] Tools to support Natural Language Processing of freetext to create structured data elements for analysis☆32Updated last year
- Data structures and code to read/write BioC XML and Json.☆32Updated last year
- A comprehensive NLP preprocessing package for clinical notes sentence boundary detection, tokenization☆31Updated last year
- Workflow Management for Biomedical exploration☆30Updated 6 years ago
- Code for manipulating the structure of UMLS files and converting ontologies or sets of ontologies into a graph structure.☆41Updated 4 years ago
- Notebooks etc. Analysis of SNOMED-CT for the Clinical Coding Pilot and related work☆12Updated 4 years ago
- ☆55Updated 5 years ago
- ☆27Updated 6 years ago
- Training materials for Vocabulary & CDM Tutorial.☆21Updated 5 years ago
- OMOP2OBO: A Python Library for mapping OMOP standardized clinical terminologies to Open Biomedical Ontologies☆88Updated last year
- ☆16Updated 4 years ago
- MedTagger is a light weight clinical NLP system built upon Apache UIMA.☆68Updated last month
- Phenotype and genotype-based patient similarity☆11Updated 5 years ago
- Identification of Human Phenotype Entities☆11Updated 6 years ago
- A generator of synthetic psychiatric notes.☆17Updated 5 years ago
- Transformers for Clinical NLP☆25Updated 2 weeks ago
- Data Ingestion and Harmonization☆44Updated last month
- Master Documentation Repository for OHNLP Projects Related to Coronavirus Disease 2019☆21Updated 2 years ago
- Python library for work with BioCreative files☆13Updated 7 years ago