AGFoersch / MultiStainDeepLearning
Code from Foersch et al. (Under Construction / Development)
☆36Updated last year
Alternatives and similar repositories for MultiStainDeepLearning:
Users that are interested in MultiStainDeepLearning are comparing it to the libraries listed below
- ☆49Updated last year
- Multimodal deep learning to predict distant recurrence-free probability from digitized H&E tumour slide and tumour stage.☆33Updated 2 months ago
- Re-stained whole slide image alignment☆32Updated last year
- Exploring prognostic indicators in pathological images of hepatocellular carcinoma based on deep learning☆41Updated 4 years ago
- ☆36Updated 2 years ago
- Solid Tumor Associative Modeling in Pathology☆58Updated this week
- [The Lancet Digital Health, MICCAI2020 Oral] The official code of "Spatially-aware Graph Neural Networks and Cross-level Molecular Profil…☆25Updated last year
- ☆26Updated 2 years ago
- machine-readable information for the TCGA dataset, mirrored from other sources☆16Updated 2 years ago
- ☆52Updated 3 years ago
- Code for the im4MEC model described in the paper 'Interpretable deep learning model to predict the molecular classification of endometria…☆38Updated last year
- Predicting gastric cancer outcome from resected lymph node histopathology images using deep learning☆35Updated 3 years ago
- First commit☆60Updated 2 years ago
- Histopathology Image Analysis☆93Updated last year
- Histopathology Slides Preprocessing Pipeline☆36Updated 2 months ago
- sc-MTOP is an analysis framework based on deep learning and computational pathology. This framework aims to characterize the tumor ecosys…☆29Updated 2 months ago
- This repo provides the pipeline of processing TCGA whole-slide images for downstream pathology analysis.☆59Updated last month
- Data and code to accompany our Nature publication☆44Updated 2 years ago
- A generative toolkit to translate H&E images to multiplexed IHC☆31Updated 2 months ago
- Deep learning enabled assessment of cardiac allograft rejection from endomyocardial biopsies- Nature Medicine☆30Updated 2 years ago
- Artificial Intelligence predicts immune and inflammatory gene signatures directly from hepatocellular carcinoma histology images☆20Updated 7 months ago
- A tutorial demonstration of pathml on an example dataset for the manuscript "PathML: A unified framework for WSI analysis with deep learn…☆22Updated 3 years ago
- Corresponding code of 'Quiros A.C.+, Coudray N.+, Yeaton A., Yang X., Chiriboga L., Karimkhan A., Narula N., Pass H., Moreira A.L., Le Qu…☆54Updated last week
- Class for getting ROIs and masks from annotated pyramidal images. A work in progress.☆12Updated 3 years ago
- Tools to build deep learning pipelines.☆91Updated 3 months ago
- This package provides tools for training supervised machine learning models for computational pathology tasks using tile-level embeddings…☆36Updated 6 months ago
- HCC_Deep_learning☆19Updated 4 years ago
- ☆18Updated last year
- ☆15Updated 2 years ago
- Histomic Prognostic Signature (HiPS): A population-level computational histologic signature for invasive breast cancer prognosis☆23Updated 10 months ago