chmille4 / Scribl
HTML5 canvas genomic graphics library
☆76Updated 5 years ago
Alternatives and similar repositories for Scribl:
Users that are interested in Scribl are comparing it to the libraries listed below
- A WGS de novo assembler based on the FMD-index for large genomes☆74Updated 11 years ago
- Blast2Bam uses the XML results of Blastn, the reference and the fastQ or fasta file(s) to output a SAM file.☆46Updated 3 years ago
- A tool to benchmark mappers and different parameters within minutes☆43Updated 5 years ago
- Genome guided re-segmention and visualization for raw nanopore sequencing data.☆46Updated 6 years ago
- High-performance error correction for Illumina resequencing data☆69Updated 8 years ago
- Read visualizer for structural variants☆81Updated 6 years ago
- Overlap assembler of paired-end DNA sequences generated by Illumina☆22Updated 8 years ago
- Automatically optimise three of Velvet's assembly parameters.☆47Updated 2 years ago
- SURPI☆84Updated 8 years ago
- Bioinformatics tool outputs converter to JSON or YAML☆36Updated 3 months ago
- SV detection from paired end reads mapping☆38Updated 14 years ago
- MetaSV: An accurate and integrative structural-variant caller for next generation sequencing☆55Updated 7 years ago
- A C++ header-only library for reading Oxford Nanopore Fast5 files☆53Updated 2 years ago
- Interactive, web-based BLAST results visualization tool. Accessible at https://kablammo.wasmuthlab.org.☆66Updated 2 years ago
- Gfapy: a flexible and extensible software library for handling sequence graphs in Python☆66Updated 3 months ago
- De novo transcriptome assembler for short reads☆62Updated 6 years ago
- A versatile toolkit for k-mers with taxonomic information☆77Updated 6 months ago
- RetroSeq is a bioinformatics tool that searches for mobile element insertions from aligned reads in a BAM file and a library of reference…☆65Updated 2 years ago
- An illumina paired-end and mate-pair short read simulator. This project attempts to model as many of the quirks that exist in Illumina da…☆66Updated 10 years ago
- LoFreq Star: Sensitive variant calling from sequencing data☆103Updated 2 years ago
- ☆49Updated 2 years ago
- Scripts for implementing read until and other examples.☆31Updated 4 years ago
- Miscellaneous Bioinformatics scripts etc mostly in Python☆45Updated 2 weeks ago
- Distribution package for the Prgressive Cactus multiple genome aligner. Dependencies are linked as submodules☆84Updated 6 years ago
- Antibiotic resistance predictions in minutes on a laptop