Alternatives and similar repositories for pviz:

Users that are interested in pviz are comparing it to the libraries listed below

• calipho-sib / sequence-viewer
  neXtProt protein sequence viewer (javascript) - From SIB CALIPHO group; neXtProt project
  ☆50Updated 2 years ago
• sanshu / protaeljs
  JavaScript library for biological data visualization
  ☆19Updated 6 years ago
• calipho-sib / feature-viewer
  Library to visualize protein sequence features in javascript using D3 - From SIB CALIPHO group; neXtProt project
  ☆112Updated 4 months ago
• jessegmeyerlab / proteomics-tutorial
  ☆56Updated 8 months ago
• ViennaRNA / forgi
  An RNA manipulation library.
  ☆53Updated 11 months ago
• slimsuite / SLiMSuite
  Open source short linear motif discovery and sequence analysis
  ☆23Updated 4 months ago
• fraenkel-lab / OmicsIntegrator
  This repository is the working directory for the Garnet-Forest bundle of python scripts for analyzing diverse forms of 'omic' data in a n…
  ☆31Updated 6 years ago
• evocellnet / funscoR
  R package for functionally scoring phosphorylation sites
  ☆19Updated 5 years ago
• psathyrella / partis
  B- and T-cell receptor sequence annotation, simulation, clonal family and germline inference, and affinity prediction
  ☆57Updated last week
• kentsisresearchgroup / UltraQuant
  MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters
  ☆26Updated 6 years ago
• galaxy-genome-annotation / docker-jbrowse
  Docker image of JBrowse Genome Browser
  ☆14Updated 3 years ago
• Victorian-Bioinformatics-Consortium / degust
  Deprecated : Use https://github.com/drpowell/degust
  ☆44Updated 7 years ago
• dosorio / Peptides
  An R package to calculate indices and theoretical physicochemical properties of peptides and protein sequences.
  ☆82Updated 11 months ago
• bigbio / ibaqpy
  Absolute quantification package based on quantms.io
  ☆11Updated this week
• mfitzp / padua
  Proteomic Data Analysis with Python (pandas, scikit-learn, numpy, scipy)
  ☆23Updated last year
• saketkc / pyseqlogo
  Python package to plot sequence logos
  ☆29Updated last year
• SBRG / Recon3D
  A 3-Dimensional View of Human Metabolism and Disease
  ☆26Updated 6 years ago
• nf-core / mhcquant
  Identify and quantify MHC eluted peptides from mass spectrometry raw data
  ☆33Updated this week
• latendre / PythonCyc
  ☆22Updated 4 years ago
• NCBI-Hackathons / SPeW
  Automatic Packaging and Distribution of Bioinformatics Pipelines
  ☆26Updated 7 years ago
• masato-ogishi / Repitope
  Epitope immunogenicity prediction through in silico TCR-peptide contact potential profiling.
  ☆23Updated last year
• openvax / pepdata
  Python interface to amino acid properties and IEDB
  ☆55Updated 3 months ago
• ebi-uniprot / ProtVista
  A BioJS viewer for protein sequence features
  ☆49Updated 2 years ago
• wfondrie / ppx
  A Python interface to proteomics data repositories
  ☆32Updated 8 months ago
• MolecularCartography / ili
  Web-based software for visualization of molecular maps in 2D and 3D
  ☆27Updated last year
• ISCB-Academy / Elements-of-Style-Reproducible-Workflow-Creation-Maintenance-Tutorial
  ☆19Updated 2 years ago
• Hypercubed / connectome
  Web tool for exploring cell-cell ligand-receptor mediated communication networks
  ☆24Updated 8 years ago
• MaayanLab / archs4
  ARCHS4 RNA-seq processing scripts and web server pages.
  ☆54Updated 4 years ago
• amaurypm / pseqsid
  Calculates pairwise sequence identity, similarity and normalized similarity score of proteins in a multiple sequence alignment.
  ☆14Updated 11 months ago