varapp / varapp-backend-py
Django backend to varapp
☆20Updated 8 years ago
Alternatives and similar repositories for varapp-backend-py:
Users that are interested in varapp-backend-py are comparing it to the libraries listed below
- Variant caller GUI + genetic disease analysis☆22Updated 4 years ago
- The Exome Coverage and Identification Report displays the coverage of every target region in your capture design. It also displays regio…☆14Updated 9 years ago
- An awk-like VCF parser☆56Updated last year
- Graphite - Graph-based variant adjudication☆28Updated 4 years ago
- Estimate damage in standard NGS library preparation. Incompatible with library preparation methods from which the imbalance is lost (such…☆52Updated 7 years ago
- QC3, a quality control tool designed for DNA sequencing data for raw data, alignment, and variant calling.☆32Updated 8 years ago
- CLAMMS is a scalable tool for detecting common and rare copy number variants from whole-exome sequencing data.☆29Updated 4 years ago
- A method to identify structural variation from sequencing data in target regions☆31Updated 4 years ago
- filtering trio-based genetic variants in VCFs for clinical review☆21Updated 4 years ago
- utilities for working with IGV: opening files remotely in either desktop IGV or a web viewer (igv.js), creating screenshots, etc.☆48Updated 5 years ago
- Concordance and contamination estimator for tumor–normal pairs☆58Updated 5 months ago
- ☆46Updated 5 years ago
- create a gemini-compatible database from a VCF☆56Updated 4 years ago
- a pileup library that embraces the huge☆42Updated 4 years ago
- Structural Variant Index☆72Updated 3 months ago
- Wrapper for RTG's vcfeval; DEPRECATED!☆21Updated 8 years ago
- Assembly Based ReAligner☆73Updated 6 years ago
- A Framework to call Structural Variants from NGS based datasets☆22Updated 7 years ago
- Linked-Read Alignment Tool☆27Updated 5 years ago
- Chanjo provides a better way to analyze coverage data in clinical sequencing.☆50Updated 3 months ago
- SiNVICT: Ultra-Sensitive Detection of Single Nucleotide Variants and Indels in Circulating Tumour DNA☆27Updated 4 years ago
- Read visualizer for structural variants☆82Updated 6 years ago
- for detecting internal tandem duplication from genome sequence data.☆11Updated 5 years ago
- an empirical Bayesian framework for mutation detection from cancer genome sequencing data☆31Updated 8 years ago
- myVCF: a web-based platform for target and exome mutations data management☆20Updated 3 years ago
- Filtering and profiling of next-generational sequencing data using region-specific rules☆76Updated last year
- The integrated pipeline for Indel detection☆17Updated 6 years ago
- Multi-sample genome coverage viewer to observe large, coverage-based anomalies alongside annotations and sample metadata☆56Updated 3 years ago
- Data and information about the Polaris study☆53Updated 5 years ago
- Python package and routines for merging VCF files☆29Updated 4 years ago