Alternatives and similar repositories for uniprot:

Users that are interested in uniprot are comparing it to the libraries listed below

• jrderuiter / geneviz
  Library for visualising genomic features in Python.
  ☆15Updated 7 years ago
• hammerlab / bai-indexer
  Build an index for your BAM Index (BAI)
  ☆17Updated 9 years ago
• qibebt-bioinfo / meta-storms
  Meta-Storms 2 is the standalone implementation of the Microbiome Search Engine (MSE; http://mse.ac.cn). This is the official software re…
  ☆10Updated 4 years ago
• luslab / luslab-nf-modules
  Luslab nextflow modules
  ☆14Updated 3 years ago
• NCBI-Codeathons / SWIGG
  A pipeline for making SWIft Genomes in a Graph (SWIGG) using k-mers
  ☆20Updated 5 years ago
• addgene / openbio
  A collection of open source bioinformatics tools developed and used by Addgene.
  ☆10Updated 4 months ago
• fikipollo / paintomics3
  Integrative visualization of multiple omic datasets onto KEGG pathways.
  ☆11Updated 3 years ago
• brentp / python-giggle
  python (cython) wrapper for https://github.com/ryanlayer/giggle for fast interval searching of huge datasets.
  ☆16Updated 6 years ago
• gogetdata / ggd-cli
  The command-line interface to GGD
  ☆42Updated 2 years ago
• fomightez / sequencework
  programs and scripts, mainly python, for analyses related to nucleic or protein sequences
  ☆24Updated this week
• EmanuelGoncalves / crispy
  Python module to analyse CRISPR-based libraries
  ☆11Updated 3 years ago
• angelovangel / faster
  A (very) fast program for getting statistics about a fastq file, the way I need them, written in Rust
  ☆30Updated 2 weeks ago
• ncbi / magicblast
  ☆35Updated last year
• waldronlab / GSEABenchmarkeR
  Reproducible GSEA Benchmarking
  ☆13Updated 3 months ago
• neilfws / utils4bioinformatics
  Little code snippets that do (hopefully) useful things
  ☆23Updated last year
• AlexsLemonade / RNA-Seq-Exercises
  Exercises for training scientists to perform some RNA-seq analyses.
  ☆11Updated 5 years ago
• bioconda / bioconda.github.io
  Bioconda is a distribution of bioinformatics software realized as a channel for the versatile package manager Conda.
  ☆37Updated this week
• annalam / seqkit
  Toolkit for manipulating FASTA and SAM files
  ☆17Updated 10 months ago
• omicidx / omicidx-parsers
  Exposing public genomics data via computable and searchable metadata
  ☆12Updated 6 months ago
• tseemann / homebrew-bioinformatics-linux
  Homebrew formulae for bioinformatics software only available for Linux
  ☆27Updated 5 years ago
• YeoLab / qtools
  qtools has helper functions to submit jobs to compute clusters (PBS on TSCC, SGE on oolite) from within Python
  ☆21Updated last year
• statOmics / stageR
  stageR package
  ☆11Updated last year
• medvir / VirMet
  Set of tools for viral metagenomics.
  ☆14Updated this week
• Guannan-Wang / GOMCL
  GOMCL: a toolkit to cluster, evaluate, and extract non-redundant associations of Gene Ontology-based functions
  ☆20Updated last year
• edawson / mkmh
  Generate kmers/minimizers/hashes/MinHash signatures, including with multiple kmer sizes.
  ☆24Updated 4 years ago
• gmcvicker / draw_genes
  A flexible python program for generating figures from regions of the genome.
  ☆13Updated 5 years ago
• Bohdan-Khomtchouk / shinyheatmap
  Web application for enormous biological heatmaps
  ☆63Updated 4 years ago
• AstraZeneca / detectIS
  A pipeline to rapidly detect exogenous DNA integration sites using DNA or RNA paired-end sequencing data
  ☆12Updated last year
• shenwei356 / strobemers
  A Go implementation of the strobemers (https://github.com/ksahlin/strobemers)
  ☆14Updated 3 years ago
• openvax / topiary
  Predict mutated T-cell epitopes from sequencing data
  ☆27Updated 6 years ago