VCF visualization interface
☆184Oct 30, 2026Updated this week
Alternatives and similar repositories for scout
Users that are interested in scout are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Annotate models of genetic inheritance patterns in variant files (vcf files)☆91Oct 26, 2026Updated last week
- Mutation Identification Pipeline. Read the latest documentation:☆48Nov 18, 2025Updated 11 months ago
- Variant caller GUI + genetic disease analysis☆22Apr 29, 2020Updated 6 years ago
- Chanjo provides a better way to analyze coverage data in clinical sequencing.☆50Oct 2, 2026Updated last month
- Call and score variants from WGS/WES of rare disease patients.☆126Updated this week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Tool to annotate outfiles from ExpansionHunter and TRGT with the pathologic implications of the repeat☆42Updated this week
- Bioinformatic Analysis pipeLine for SomAtic Mutations In Cancer☆59Oct 22, 2026Updated last week
- ☆21Sep 28, 2026Updated last month
- A simple observation count database☆11Oct 26, 2026Updated last week
- structural variant database software☆50Updated this week
- An analysis pipeline for long-reads from both PacBio and Oxford Nanopore Technologies (ONT), written in Nextflow.☆75Updated this week
- Rails application for storing and parsing clinical exome VCF files. Gene annotations can be retrieved via Biomart integration from Ensemb…☆10May 7, 2017Updated 9 years ago
- fast sample-swap and relatedness checks on BAMs/CRAMs/VCFs/GVCFs... "like damn that is one smart wine guy"☆341Oct 23, 2026Updated last week
- VarFish: comprehensive DNA variant analysis for diagnostics and research☆54Oct 24, 2026Updated last week
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- genotype :: ped correspondence check, ancestry check, sex check. directly, quickly on VCF☆152Feb 17, 2026Updated 8 months ago
- Pathogenicity prediction and prioritization of genetic variants.☆20Sep 21, 2026Updated last month
- create a gemini-compatible database from a VCF☆55Jan 5, 2021Updated 5 years ago
- Personal Cancer Genome Reporter (PCGR)☆284Updated this week
- A nextflow pipeline for analysing expression and splicing in RNA seq data from rare disease patient☆20Oct 15, 2026Updated 2 weeks ago
- annotate a VCF with other VCFs/BEDs/tabixed files☆404Jun 16, 2026Updated 4 months ago
- VVP (VAAST Variant Prioritizer) rapidly prioritizes genetic variants☆18Mar 10, 2018Updated 8 years ago
- A nextflow pipeline for calling CNVs in probe-enriched sequencing workflows☆14Oct 20, 2026Updated last week
- Detect germline or somatic variants from normal or tumour/normal whole-genome or targeted sequencing☆134Jan 27, 2020Updated 6 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- A copy number caller for SMN1 and SMN2 to enable SMA diagnosis and carrier screening with WGS☆51Oct 14, 2023Updated 3 years ago
- Generic human DNA variant annotation pipeline☆59Aug 11, 2026Updated 2 months ago
- VCF-Miner: A graphical user interface for sorting, filtering and querying annotated VCF Files☆37Nov 19, 2019Updated 6 years ago
- RTG Tools: Utilities for accurate VCF comparison and manipulation☆339May 27, 2025Updated last year
- Ximmer is a system for CNV calling on exome and targeted genomic sequencing☆19Oct 23, 2026Updated last week
- a lightweight db framework for exploring genetic variation.☆327Apr 28, 2020Updated 6 years ago
- REEV: Explanation and Evaluation of Variants☆11Apr 27, 2026Updated 6 months ago
- genetic variant expressions, annotation, and filtering for great good.☆274May 12, 2026Updated 5 months ago
- Robust detection of clinically relevant structural and copy number variation from whole genome sequencing data☆75Sep 4, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Plot structural variant signals from many BAMs and CRAMs☆573Jul 13, 2024Updated 2 years ago
- A bioinformatics software tool for clinical interpretation of genetic variants by the 2015 ACMG-AMP guideline☆215May 28, 2023Updated 3 years ago
- Genomics database manager☆25Mar 3, 2014Updated 12 years ago
- using all the bits for echt rapid variant annotation and filtering☆166Jul 22, 2026Updated 3 months ago
- ☆13Oct 7, 2026Updated 3 weeks ago
- ☆10Updated this week
- TIDDIT - structural variant calling☆80Jul 20, 2026Updated 3 months ago