SynBioDex / pySBOL
SWIG-Python wrappers implementing SBOL 2.2
☆25Updated 3 years ago
Alternatives and similar repositories for pySBOL:
Users that are interested in pySBOL are comparing it to the libraries listed below
- Coral, a library and framework for specifying synthetic biology design processes.☆33Updated 2 years ago
- A COBRApy extension for genome-scale models of metabolism and expression (ME-models)☆36Updated 6 years ago
- Simple cloning simulator (Golden Gate etc.) for single and combinatorial assemblies☆57Updated last month
- Efficiently keep track of changes to genomes☆38Updated 9 months ago
- A python wrapper for the benchling api☆50Updated 4 years ago
- 🎺 Plot DNA digestion band patterns with Python☆20Updated last month
- Generate biomass objective function stoichiometric coefficients for genome-scale models from experimental data☆27Updated last year
- A route planner for DNA assembly☆33Updated last month
- ☆22Updated 4 years ago
- 🎨 Python library to plot multi-part genetic constructs☆25Updated last month
- Laboratory Open Protocol (LabOP) Language☆42Updated 7 months ago
- COBRAdb loads genome-scale metabolic models and genome annotations into a relational database. It already powers BiGG Models, and it is a…☆20Updated 5 years ago
- The BiGG Models website server☆81Updated 5 years ago
- ☆23Updated 2 years ago
- cameo - computer aided metabolic engineering & optimization☆115Updated 2 years ago
- A pure Python implementation of the SBOL standard.☆22Updated 2 months ago
- The Ribosome Binding Site (RBS) Calculator can predict the translation initiation rate of a protein coding sequence in bacteria and desig…☆56Updated 9 years ago
- SBOL Designer Project☆32Updated 3 years ago
- retrieve protein sequence identifiers and metadata from http://uniprot.org☆67Updated 3 years ago
- Python interface to amino acid properties and IEDB☆56Updated 7 months ago
- Clone with Python! Data structures for double stranded DNA & simulation of homologous recombination, Gibson assembly, cut & paste cloning…☆177Updated 3 weeks ago
- Draw genetic elements with HTML & CSS☆16Updated 8 years ago
- PyCogent: Official repository for software and unit tests☆91Updated 4 years ago
- ☆24Updated last month
- Enzyme-constrained genome-scale models in python☆28Updated last year
- biotoolsregistry : discovery portal for bioinformatics☆77Updated this week
- D3.js based visualizations of cobrapy metabolic models☆45Updated 5 years ago
- 🤖 Python biolab automation library: parsers, report generators, picklist simulators, and more☆44Updated last month
- A Python framework for structural systems biology☆107Updated 4 years ago
- DeepMetabolism is a deep learning algorithm to predict phenotype from genome sequencing☆31Updated 7 years ago