Starter repository for submissions to the CausalBench challenge for gene-gene graph inference from genetic perturbation experiments.
☆33May 17, 2023Updated 3 years ago
Alternatives and similar repositories for causalbench-starter
Users that are interested in causalbench-starter are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- An open-source package of causal feature selection and causal (Bayesian network) structure learning (Python version)☆19Dec 21, 2020Updated 5 years ago
- BaCaDI: Bayesian Causal Discovery with Unknown Interventions☆15Feb 23, 2023Updated 3 years ago
- ☆65Jun 11, 2025Updated last year
- An open-source package of causal feature selection and causal (Bayesian network) structure learning (C/C++ version)☆62Nov 17, 2020Updated 5 years ago
- A flexible Julia toolkit for high-dimensional cellular profiles☆13Jul 14, 2023Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ☆14Jan 25, 2024Updated 2 years ago
- Multi-Objective Causal Bayesian Optimisation, a new paradigm for finding Pareto-optimal interventions in multi-outcome causal models☆18Jun 2, 2025Updated last year
- Code and example of the D-SPIN framework☆39May 12, 2026Updated last month
- scNOVA : Single-Cell Nucleosome Occupancy and genetic Variation Analysis☆12Jul 29, 2023Updated 2 years ago
- Easy to use encryption tools for R☆19Jan 31, 2025Updated last year
- ☆11Jun 23, 2026Updated last week
- Single cell Morphology Quality Control (coSMicQC)☆11Jun 22, 2026Updated last week
- Active Learning-Assisted Directed Evolution for Protein Engineering☆83Oct 24, 2025Updated 8 months ago
- ☆10Nov 29, 2022Updated 3 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Repository for "Differentiable Causal Discovery from Interventional Data"☆80Jan 31, 2022Updated 4 years ago
- Scripts associated with the 2023 Open Problems competition☆11Nov 23, 2023Updated 2 years ago
- Framework for Object Oriented Modelling of Bioprocesses☆18Feb 18, 2021Updated 5 years ago
- shadchen is a common lisp pattern matching library.☆24Aug 22, 2013Updated 12 years ago
- Delicatessen: the Python one-stop sandwich (variance) shop 🥪☆30May 18, 2026Updated last month
- WebDAV server written in Common Lisp☆22Dec 22, 2017Updated 8 years ago
- Causal discovery of gene regulatory programs from single-cell genomics☆19Sep 5, 2025Updated 9 months ago
- Pipeline to find transcription factor footprints in DNase-seq or ATAC-seq datasets☆13Nov 24, 2018Updated 7 years ago
- ☆13Mar 17, 2021Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Oaknut is a block theme designed to help you create Linktree-esque profile pages.☆18May 3, 2024Updated 2 years ago
- Compendium of tools for the Imaging Platform☆16Jun 12, 2026Updated 3 weeks ago
- Monads for Common Lisp☆20Sep 21, 2024Updated last year
- ☆10Mar 23, 2024Updated 2 years ago
- A collection of Image Processing and Analysis (IPA) functions used at the Facility for Advanced Imaging and Microscopy (FAIM)☆20Updated this week
- Structure learning based for zero-inflated negative binomial data☆10Jul 11, 2024Updated last year
- Test genes for Spatial Variation☆15Dec 20, 2024Updated last year
- Code to reproduce experiments in "Accelerating Bayesian Optimization for Protein Design with Denoising Autoencoders" (Stanton et al 2022)☆77May 19, 2024Updated 2 years ago
- UFFI bindings to the GD graphics library☆17Oct 21, 2020Updated 5 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- An interpretable and flexible deep learning framework for single-T cell transcriptome and receptor analysis☆16Jun 9, 2026Updated 3 weeks ago
- ☆12Aug 19, 2025Updated 10 months ago
- ☆39Apr 1, 2026Updated 3 months ago
- Napari Visualization tool for Trackmate > 6.0 XML files for 2/3D + time tracks. Available via pip package napatrackmater.☆18Oct 8, 2025Updated 8 months ago
- ☆12Jan 27, 2022Updated 4 years ago
- Scripts for plotting figures and running analysis throughout the manuscript☆11Nov 2, 2021Updated 4 years ago
- Source code for fitting thermodynamic models (MoCHI), downstream analyses and to reproduce all figures in the following publication: Mapp…☆22Jul 20, 2023Updated 2 years ago