Detect somatic variants from tumor and normal WGS/WXS data
☆19Apr 24, 2026Updated this week
Alternatives and similar repositories for somaticwrapper
Users that are interested in somaticwrapper are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- VirusScan Pipeline☆12Feb 7, 2026Updated 2 months ago
- 3D hotspot mutation proximity analysis tool☆53Mar 31, 2023Updated 3 years ago
- ☆11Jun 14, 2023Updated 2 years ago
- do some exercise☆14Dec 2, 2025Updated 4 months ago
- ☆20Feb 24, 2017Updated 9 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Repo with analysis code for the vascular atlas paper☆10Nov 22, 2024Updated last year
- ☆14Mar 28, 2025Updated last year
- ☆13Apr 27, 2022Updated 4 years ago
- Minimal scripts to reproduce the RADICL-seq analysis of the Nature Communications manuscript☆11Jan 30, 2020Updated 6 years ago
- Publically accessible code for DIISCO method☆13Oct 15, 2025Updated 6 months ago
- ☆10Dec 14, 2016Updated 9 years ago
- Pre-mAsking Long reads for Mobile Element inseRtion☆20Feb 9, 2026Updated 2 months ago
- ☆15Oct 16, 2025Updated 6 months ago
- ☆11Mar 16, 2020Updated 6 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- HiC-Reg is a tool to predict Hi-C contact counts from one-dimensional regulatory signals☆11Aug 25, 2020Updated 5 years ago
- Easily Process a Batch of Cox Models☆23Jul 26, 2025Updated 9 months ago
- Method for de novo mutation calling from droplet based single cell RNA seq data☆14Oct 6, 2021Updated 4 years ago
- R script for calculating the SpatialScore as described in our manuscript: "Immune cell topography predicts response to PD-1 blockade in c…☆17Sep 26, 2021Updated 4 years ago
- The full training script for Enformer - Tensorflow Sonnet☆18Apr 18, 2022Updated 4 years ago
- ☆14Dec 15, 2019Updated 6 years ago
- ☆29Apr 16, 2023Updated 3 years ago
- ☆12Apr 16, 2026Updated last week
- scripts used for processing and analyzing data in the article.☆13Oct 31, 2019Updated 6 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆27May 8, 2022Updated 3 years ago
- ☆12Sep 11, 2025Updated 7 months ago
- Enhanced version of the FastQTL QTL mapper☆72Mar 19, 2023Updated 3 years ago
- ☆11Sep 17, 2020Updated 5 years ago
- SNV calling from single cell sequencing☆118Nov 11, 2024Updated last year
- BIC@MSKCC Variants Pipeline☆23Mar 28, 2023Updated 3 years ago
- ☆22Mar 22, 2023Updated 3 years ago
- Code to reproduce "Detecting liver cancer using cell-free DNA fragmentomes☆11Nov 18, 2022Updated 3 years ago
- Flow2Spatial reconstructs spatial proteomics through transfer learning.☆22May 16, 2025Updated 11 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆12Apr 10, 2021Updated 5 years ago
- RNA-seq analysis pipeline for detection of gene-fusions☆173Mar 18, 2026Updated last month
- extract SV signal from a BAM☆11Jul 26, 2018Updated 7 years ago
- ☆18Apr 4, 2025Updated last year
- Analyzing Hi-C data in R with HiCExperiment objects☆16Apr 19, 2026Updated last week
- ActiveDriverDB☆12May 1, 2023Updated 2 years ago
- single cell analysis of treatment naive and treated human PDAC☆25May 27, 2022Updated 3 years ago