bytedance / HMRLinks
Learning Harmonic Molecular Representations on Riemannian Manifold, ICLR, 2023
☆24Updated 2 years ago
Alternatives and similar repositories for HMR
Users that are interested in HMR are comparing it to the libraries listed below
Sorting:
- Full-Atom Peptide Design based on Multi-modal Flow Matching (ICML 2024)☆95Updated 6 months ago
- This repo contains the codes for our paper Conditional Antibody Design as 3D Equivariant Graph Translation.☆99Updated 2 years ago
- Official Implemetation of ConfDiff (ICML'24) - Protein Conformation Generation via Force-Guided SE(3) Diffusion Models☆71Updated last year
- Rotamer Density Estimator is an Unsupervised Learner of the Effect of Mutations on Protein-Protein Interaction (ICLR 2023)☆59Updated last year
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆121Updated 9 months ago
- ☆107Updated 2 years ago
- ☆95Updated last year
- Codes for our paper "Full-Atom Peptide Design with Geometric Latent Diffusion" (NeurIPS 2024)☆96Updated 7 months ago
- ☆76Updated 9 months ago
- Predicting mutational effects on protein-protein binding via a side-chain diffusion probabilistic model (NeurIPS 2023 Poster)☆36Updated last year
- Official repository of ReactZyme☆36Updated last year
- Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.☆84Updated last year
- Implementation of DiffPack: A Torsional Diffusion Model for Autoregressive Protein Side-Chain Packing☆88Updated last year
- Sequence-Structure-Surface Model for Protein Fitness Prediction (S3F)☆46Updated 11 months ago
- ☆65Updated 2 years ago
- ESM-GearNet for Protein Structure Representation Learning (https://arxiv.org/abs/2303.06275)☆111Updated 2 years ago
- ☆33Updated 8 months ago
- Implementation of MapDiff: "Mask-prior-guided denoising diffusion improves inverse protein folding" in PyTorch☆41Updated 4 months ago
- Evaluating Protein Binding Interfaces with Transformer Networks☆46Updated 2 years ago
- An awesome & curated list of docking papers☆118Updated 8 months ago
- Code implementation of "Diffusion probabilistic modeling of protein backbones in 3D for the motif-scaffolding problem" https://arxiv.org/…☆73Updated 2 years ago
- Code for humanization of antibody and nanobody☆64Updated 3 months ago
- [ICLR 2024] Protein-Ligand Interaction Prior for Binding-aware 3D Molecule Diffusion Models☆53Updated last year
- Public Release of ProGen3 family of Models☆88Updated 4 months ago
- A standardized protein design benchmark for motif-scaffolding problems☆70Updated 4 months ago
- ☆128Updated 5 months ago
- A Text-guided Protein Design Framework, Nat Mach Intell 2025 (https://www.nature.com/articles/s42256-025-01011-z)☆96Updated 10 months ago
- Codebase of paper "Structure Language Models for Protein Conformation Generation" (ICLR'25)☆66Updated 9 months ago
- Codes for our paper "UniMoMo: Unified Generative Modeling of 3D Molecules for De Novo Binder Design" (ICML 2025)☆64Updated last month
- ☆52Updated 6 months ago