buithuytien / GeneCloudOmicsLinks
A Biostatistical tool for Transcriptomics Analysis
☆22Updated 3 years ago
Alternatives and similar repositories for GeneCloudOmics
Users that are interested in GeneCloudOmics are comparing it to the libraries listed below
Sorting:
- Reference-guided multiple sequence alignment of viral genomes☆70Updated 2 months ago
- TreeGrafter is a new software tool for annotating uncharacterized protein sequences, using annotated phylogenetic trees.☆13Updated 6 months ago
- 🧬 MSABrowser: dynamic and fast visualization of sequence alignments, variations, and annotations☆35Updated last year
- programs and scripts, mainly python, for analyses related to nucleic or protein sequences☆24Updated 2 months ago
- Quality assessment of de novo transcriptome assemblies from RNA-Seq data☆25Updated 2 months ago
- Protein Alignment and Detection Interface☆60Updated last year
- A program for fast and accurate genome-guided transcripts reconstruction and quantification from RNA-seq (Supporting Pacbio single-end)☆24Updated 4 years ago
- PhyloCSF++ computes PhyloCSF tracks for whole-genome multiple sequence alignments, scores single MSA, annotates CDS features in GFF/GTF f…☆31Updated 4 years ago
- VIRULIGN: fast codon-correct alignment and annotation of viral genomes☆35Updated 4 years ago
- Hybridization probe design for targeted genomic sequencing of diverse and hypervariable viral taxa☆25Updated 2 years ago
- A package for designing activity-informed nucleic acid diagnostics for viruses.☆35Updated 2 years ago
- Re-analysis of data provided by Gihawi et al. 2023 bioRxiv☆26Updated 2 years ago
- A pipeline for preprocessing NGS data from Illumina, Nanopore and PacBio technologies☆35Updated last year
- Hclust2 is a handy tool for plotting heat-maps with several useful options to produce high quality figures that can be used in publicatio…☆12Updated 3 years ago
- interactive plots for differential expression analysis☆34Updated 7 months ago
- pathway based data integration and visualization☆46Updated 10 months ago
- Visualization of the pan-genome output by panX☆66Updated 7 months ago
- ANNOgesic - A Swiss army knife for the RNA-Seq based annotation of bacterial/archaeal genomes☆33Updated last year
- BigSeqKit: a parallel Big Data toolkit to process FASTA and FASTQ files at scale☆57Updated 2 years ago
- A Nextflow pipeline to identify quality control issues with new sequencing data.☆28Updated 2 years ago
- for visual evaluation of read support for structural variation☆55Updated last year
- SAMStat displays various properties of next-generation sequencing reads stored in SAM/BAM format.☆24Updated 2 years ago
- ORF prediction using python☆12Updated 4 years ago
- A snakemake workflow for metagenomic projects☆15Updated 2 years ago
- Accurate, Lightweight Clustering of de novo Transcriptomes using Fragment Equivalence Classes☆31Updated last year
- Ultra-efficient taxonomic mapping of NGS data☆51Updated 4 years ago
- A very simple BLAST filtering pipeline☆19Updated 11 years ago
- Reference Phylogeny for Bacterial and Archaeal Genomes☆25Updated 5 months ago
- ☆17Updated 6 months ago
- visual analysis of your VCF files☆38Updated 3 years ago