A Biostatistical tool for Transcriptomics Analysis
☆22Feb 19, 2022Updated 4 years ago
Alternatives and similar repositories for GeneCloudOmics
Users that are interested in GeneCloudOmics are comparing it to the libraries listed below
Sorting:
- A new web-based HTML5 genome browser. Genome Maps can also browse BAM and VCFs files among other formats.☆27Sep 24, 2013Updated 12 years ago
- Package for genetic network analysis of GWAS summary statistics☆17Aug 24, 2025Updated 6 months ago
- A FASTQ quality assessment tool☆14Oct 9, 2025Updated 5 months ago
- Random utility scripts for genomics data☆12Feb 22, 2021Updated 5 years ago
- Multi-omics module that includes RNAseq, Epigenetics, and integrated multi-omics analyses developed as part of the NIGMS Sandbox project☆12Jun 6, 2025Updated 9 months ago
- For this project, I used publicly available Electronic Health Records (EHRs) datasets. The MIT Media Lab for Computational Physiology has…☆20Mar 14, 2024Updated 2 years ago
- Software to help identify overlap between association scan results and GWAS hit catalogs.☆15Aug 26, 2022Updated 3 years ago
- Automated pipeline for amplicon sequence analysis☆11Nov 25, 2025Updated 3 months ago
- An R package for creating 3D barplots☆12Jan 8, 2023Updated 3 years ago
- Workshop: Using R/tidyverse to analyze & visualize gapminder/processed transcriptomics data!☆13Sep 12, 2025Updated 6 months ago
- Parallel solution for local RNA secondary structure analysis☆12Feb 14, 2023Updated 3 years ago
- 16S pipeline using qiime2 created with snakemake☆12Jan 2, 2026Updated 2 months ago
- Munge GenBank files into FASTA and tab-separated metadata☆15Feb 5, 2026Updated last month
- Issues and pull requests for BiocStyle should go here.☆14Oct 30, 2025Updated 4 months ago
- Slinker offers a succinct and complementary method to visualise RNA-Seq data through superTranscripts.☆19Jun 13, 2022Updated 3 years ago
- TWAS-pipeline☆24Feb 21, 2021Updated 5 years ago
- An R package for plotting GWAS results from the GAPIT package☆14Oct 9, 2025Updated 5 months ago
- Fitting latent factor mixed models☆13Jun 12, 2020Updated 5 years ago
- Python wrappers for programs that search for transposable elements☆19Jul 12, 2016Updated 9 years ago
- Prediction of microbial interactions in complex communities☆11Aug 14, 2024Updated last year
- Module and script to remove contamination in assembled genomes before submission to ncbi☆14Jul 28, 2025Updated 7 months ago
- Detection of NCLDV signatures in 'omic data☆35Dec 28, 2025Updated 2 months ago
- heterogeneous BLAST (H-BLAST), a fast parallel search tool for a heterogeneous computer that couples CPUs and GPUs, to accelerate BLASTX…☆12Jun 20, 2018Updated 7 years ago
- iPat allows you to perform GWAS and GS with drags and clicks!☆11Jul 12, 2022Updated 3 years ago
- Deep learning embedding for nucleotide sequences☆20Mar 12, 2026Updated last week
- Scripts supporting identification of genomic features affecting survival time in cancer☆12Dec 6, 2018Updated 7 years ago
- ☆29Sep 28, 2021Updated 4 years ago
- R package for binmap☆12Aug 3, 2023Updated 2 years ago
- Added functions for Echidna in R☆11Apr 14, 2023Updated 2 years ago
- Virtual screening and cheminformatics utilities☆14Jan 20, 2016Updated 10 years ago
- EPSAPG: An Extensive Protein Sequence Alignment Profiles Generator Pipeline Combining MMseqs2 and PSI-BLAST☆11Apr 4, 2024Updated last year
- A simple variant calling and annotation pipeline using BWA, GATK and ENSEMBL. This version of the pipeline uses the Rubra/Ruffus framewor…☆34Mar 18, 2014Updated 12 years ago
- mreps: software for tandem repeat identification in DNA☆15Nov 13, 2019Updated 6 years ago
- Zhou & Stephens (2014) GEMMA multivariate linear mixed model☆12Oct 24, 2020Updated 5 years ago
- An innovative GWAS procedure for studies on germplasm population and plant breeding☆14Nov 16, 2020Updated 5 years ago
- A tool used to cut adapter / qc / trimming / split / statistics for fastq data, it was developed in C.☆10Apr 9, 2018Updated 7 years ago
- uORF-Tools are a workflow and a collection of tools for the analysis of 'Upstream Open Reading Frames' (short uORFs)☆13Jul 30, 2019Updated 6 years ago
- A python tool for numerically encoding protein sequences based on PSSM profile☆13Jun 25, 2021Updated 4 years ago
- SVG based genome viewer written in javascript using D3☆33Jul 12, 2015Updated 10 years ago