Alternatives and similar repositories for PyHDX

Users that are interested in PyHDX are comparing it to the libraries listed below

• molstar / ipymolstar
  Mol* as anywidget
  ☆43Updated 3 weeks ago
• awesome-panel / panel-chemistry
  🧪📈 🐍. The purpose of the panel-chemistry project is to make it really easy for you to do DATA ANALYSIS and build powerful DATA AND VI…
  ☆121Updated last year
• whitead / skunk
  Insert SVG images into matplotlib elements. Can be used to also compose matplotlib plots by nesting them.
  ☆86Updated 2 months ago
• MolQL / molql
  Molecular Query Language
  ☆34Updated last year
• everburstSun / dash-molstar
  The molstar plugin for plotly dash framework
  ☆26Updated last week
• reymond-group / faerun-python
  A python module for generating interactive views of chemical spaces.
  ☆75Updated 2 years ago
• kolibril13 / ipyMolecularNodes
  molecular plots in Jupyter, powererd by Blender Geometry Nodes
  ☆55Updated last year
• molstar / molrender
  Create macromolecular images
  ☆33Updated 6 months ago
• cgohlke / molmass
  Molecular mass calculations.
  ☆63Updated last month
• ocramz / jupyter-docker-pymol
  Container-based installation of pymol, with interaction through the browser via Jupyter notebook
  ☆20Updated 6 years ago
• Pappulab / localCIDER
  localCIDER - sequence analysis tool for disordered protein sequences
  ☆25Updated 2 years ago
• quantumjot / PyFolding
  Python framework for multi-parameter optimization and evaluation of protein folding models
  ☆17Updated 4 years ago
• PolusAI / sophios
  A domain specific language for creating scientific pipelines
  ☆16Updated 3 weeks ago
• sebotic / cdk_pywrapper
  A Python wrapper for the Chemistry Development Kit (CDK)
  ☆38Updated last month
• EnzymeML / PyEnzyme
  🧬 - Data management and modeling framework based on EnzymeML.
  ☆25Updated 2 weeks ago
• tridentbio / trident-chemwidgets
  Jupyter Widgets to interact with molecular datasets.
  ☆31Updated 3 years ago
• cxhernandez / ipymol
  Control PyMOL sessions via IPython
  ☆61Updated 3 years ago
• LoLab-MSM / pyvipr
  Jupyter widget for the dynamic and static visualizations of systems biology models written in PySB, BNGL, and SBML
  ☆27Updated 2 years ago
• pnnl / MSAC
  ☆23Updated 7 months ago
• EMSL-Computing / CoreMS
  CoreMS is a comprehensive mass spectrometry software framework
  ☆61Updated last week
• choderalab / ensembler
  Automated omics-scale protein modeling and simulation setup.
  ☆53Updated 4 years ago
• Autodesk / notebook-molecular-visualization
  2D and 3D molecular visualization in Jupyter notebooks using 3DMol.js and D3.js
  ☆82Updated 7 years ago
• visdesignlab / persist
  Persist is a JupyterLab extension to enable persistent interactive visualizations in JupyterLab notebooks.
  ☆45Updated 6 months ago
• insilichem / pychimera
  Use UCSF Chimera Python API in a standard interpreter
  ☆59Updated 6 years ago
• sbl-sdsc / mmtf-pyspark
  Methods for the parallel and distributed analysis and mining of the Protein Data Bank using MMTF and Apache Spark.
  ☆67Updated 2 years ago
• srivarra / annsel
  A user-friendly library that brings familiar DataFrame-style operations to AnnData objects with a simple and expressive API.
  ☆12Updated last week
• GPCRviz / flareplot
  Visualization tool for changing networks
  ☆20Updated 7 years ago
• biotite-dev / ammolite
  Visualize structure data from Biotite with PyMOL
  ☆26Updated 7 months ago
• hainm / molstarview
  This repo is deprecated. I move the work to support molstar in nglview: https://github.com/nglviewer/nglview
  ☆12Updated 11 months ago
• salilab / imp
  The Integrative Modeling Platform
  ☆77Updated last week