An R package for the analysis of infectious disease transmission data
☆10Nov 8, 2021Updated 4 years ago
Alternatives and similar repositories for TranStat
Users that are interested in TranStat are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Estimate epidemiological delay distributions with brms☆16Jun 22, 2026Updated last month
- Bayesian Modelling in Epidemiology Case Line Lists☆14Oct 7, 2025Updated 9 months ago
- An R package containing functions used in the CDC Flu Forecasting competition☆11Oct 18, 2020Updated 5 years ago
- Short course on parametric survival analysis☆15Apr 13, 2026Updated 3 months ago
- Estimate epidemiological quantities from repeated cross-sectional prevalence measurements☆17Nov 10, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- CRAN Task View: Epidemiology☆23Jun 6, 2026Updated last month
- R package with classes and helper functions for working with epidemiological parameters and access to a library of epidemiological parame…☆39Jul 1, 2026Updated 3 weeks ago
- Leaping through tree space: continuous phylogenetic inference for rooted and unrooted trees☆12Sep 6, 2023Updated 2 years ago
- Guidelines and forecasts for a collaborative U.S. influenza forecasting project.☆39May 4, 2020Updated 6 years ago
- ☆44Apr 13, 2026Updated 3 months ago
- A framework for data-driven stochastic disease spread simulations☆38Updated this week
- ☆12May 12, 2019Updated 7 years ago
- Additional censored event tools for Distributions.jl☆15Updated this week
- Bayesian spatio-temporal methods for small-area estimation of HIV indicators (PhD thesis, Imperial College London, 2023)☆16Nov 11, 2025Updated 8 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Repository to the R package nowcaster, nowcasting with INLA☆24Jun 23, 2026Updated 3 weeks ago
- Estimating time trees from very large phylogenies☆28Jul 21, 2024Updated 2 years ago
- Applied category theory applied to epidemiological models☆12Aug 7, 2024Updated last year
- R package to implement and visualize several epidemiological forecasting methods.☆20Jul 19, 2024Updated 2 years ago
- Some code for monkeypox☆10Jan 24, 2023Updated 3 years ago
- Gaussian processes on graphs and lattices in Stan.☆19Mar 17, 2025Updated last year
- Molecular Epidemiology of Viruses in R☆20Sep 24, 2015Updated 10 years ago
- European Covid-19 Forecast Hub.☆49Jul 4, 2026Updated 2 weeks ago
- ☆21Nov 5, 2018Updated 7 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- ☆12Jul 14, 2026Updated last week
- Grouped dates in R☆21Mar 25, 2026Updated 3 months ago
- Coalescent simulation and likelihood for phylodynamic inference☆16May 15, 2025Updated last year
- Tools for building predictive models in epidemiology.☆17Updated this week
- Helper functions for using mgcv☆12Oct 10, 2019Updated 6 years ago
- Ecological forecasting using Dynamic Generalized Additive Models with R 📦's {mvgam} and {brms}☆41Mar 28, 2025Updated last year
- R package with tools for distance metrics☆18Nov 24, 2025Updated 7 months ago
- An R package for Bayes Linear emulation and history matching.☆19Dec 1, 2025Updated 7 months ago
- PhyDyn: Epidemiological modelling in BEAST☆21Dec 22, 2022Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Utility provides a more meaningful measure of forecast skill than goodness-of-fit☆18Apr 26, 2022Updated 4 years ago
- ☆18Mar 30, 2026Updated 3 months ago
- Shiny based data explorer with report templates based on field selection☆11Oct 27, 2015Updated 10 years ago
- Contemporary statistical inference for infectious disease models using Stan☆16Mar 3, 2019Updated 7 years ago
- Time varying vector autoregressive state space modeling of community interactions in a Bayesian framework☆12Oct 4, 2021Updated 4 years ago
- This repository contains python implementations of scoring rules for forecasts provided in a prediction interval format.☆11Jul 31, 2020Updated 5 years ago
- Course on nowcasting and forecasting of infectious disease dynamics☆24Jul 14, 2026Updated last week