BioReason: Incentivizing Multimodal Biological Reasoning within a DNA-LLM Model | NeurIPS '25
☆394May 28, 2026Updated last month
Alternatives and similar repositories for BioReason
Users that are interested in BioReason are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Analyses related to the Borzoi paper.☆29Dec 14, 2025Updated 6 months ago
- CRISPSR-GPT LLM Agent Public Welcome Page☆171Aug 15, 2025Updated 10 months ago
- This API provides programmatic access to the AlphaGenome model developed by Google DeepMind.☆1,947Jun 26, 2026Updated last week
- Genome modeling and design across all domains of life☆3,975Jun 19, 2026Updated 2 weeks ago
- CodonTransformer (2M+ Downloads); The tool for codon optimization, optimizing DNA for protein expression☆215Jul 27, 2025Updated 11 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A Protein Large Language Model for Multi-Task Protein Language Processing☆207Sep 30, 2025Updated 9 months ago
- Perturbation-response Score (PS) analysis is a method to quantify diverse perturbation responses and discover novel biological insights i…☆17Apr 20, 2024Updated 2 years ago
- Cell2Sentence: Teaching Large Language Models the Language of Biology☆871Nov 4, 2025Updated 8 months ago
- ☆150Nov 6, 2025Updated 8 months ago
- Publically accessible code for DIISCO method☆13Oct 15, 2025Updated 8 months ago
- Generating Protein Variants with Different Generative Models (HMM, VAE, ESM-2, ProtGPT2)☆11Mar 14, 2024Updated 2 years ago
- Drug Response Prediction and Biomarker Discovery Using Multi-Modal Deep Learning☆14Apr 24, 2024Updated 2 years ago
- ☆320Mar 18, 2024Updated 2 years ago
- This repository contains data and other materials related to the DeepPT manuscript☆17Mar 12, 2024Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- VariantFormer: A hierarchical transformer integrating DNA sequences with genetic variations☆32May 3, 2026Updated 2 months ago
- Code for the DISCO model: General Multimodal Protein Design Enables DNA-Encoding of Chemistry☆205May 13, 2026Updated last month
- ☆1,590Apr 29, 2026Updated 2 months ago
- Code and example of the D-SPIN framework☆39May 12, 2026Updated last month
- An AI agent for spatial biology☆193May 4, 2026Updated 2 months ago
- X-Cell: a diffusion language model for genome-scale perturbation prediction☆102Mar 16, 2026Updated 3 months ago
- ☆21Oct 22, 2024Updated last year
- ☆16Feb 14, 2025Updated last year
- 🎈 Structure-aware adapter fine-tuning PLMs, with high training speed and impressive performance (Journal of Chemical Information and Mod…☆27May 16, 2025Updated last year
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Plasmid.ai is the largest open-source toolkit for developing plasmid foundation models.☆14Jan 22, 2025Updated last year
- ☆18Mar 31, 2026Updated 3 months ago
- Pretraining infrastructure for multi-hybrid AI model architectures☆242Feb 20, 2026Updated 4 months ago
- Orthrus is a mature RNA model for RNA property prediction. It uses a mamba encoder backbone, a variant of state-space models specifical…☆125Dec 10, 2025Updated 6 months ago
- Flow2Spatial reconstructs spatial proteomics through transfer learning.☆25May 16, 2025Updated last year
- ☆33Aug 12, 2024Updated last year
- Python Implementation of Codon Adaption Index☆37Feb 1, 2023Updated 3 years ago
- ☆14Jun 5, 2024Updated 2 years ago
- ☆78Feb 11, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- SPACE: STRING proteins as complementary embeddings☆41Apr 10, 2026Updated 2 months ago
- ☆61May 29, 2025Updated last year
- ☆24Jun 18, 2026Updated 2 weeks ago
- Construct Tumor Transition Zone Microenvironment☆58Jun 25, 2025Updated last year
- ☆14Aug 14, 2023Updated 2 years ago
- A Rust-Based suite of utilities for ultra-fast genomic feature extraction☆43Dec 18, 2025Updated 6 months ago
- Masked language models of biosynthetic gene clusters☆18Jul 27, 2022Updated 3 years ago