VariantFormer: A hierarchical transformer integrating DNA sequences with genetic variations
☆32May 3, 2026Updated 2 months ago
Alternatives and similar repositories for variantformer
Users that are interested in variantformer are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Generative model for reconstruction of structures from cryoET☆19Nov 6, 2025Updated 8 months ago
- ☆31Jan 22, 2025Updated last year
- Public repo for rbio, a biologically-informed reasoning model trained on virtual cell models as verifiers☆144Nov 24, 2025Updated 7 months ago
- Evaluating genomic sequence models for explaining personalized expression variation☆20Dec 6, 2023Updated 2 years ago
- Implementation of AlphaGenome, Deepmind's updated genomic attention model☆15Feb 4, 2026Updated 5 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- The computational and statistical analyses of TenK10K phase 1 multiome data☆17May 12, 2026Updated 2 months ago
- ☆155Nov 6, 2025Updated 8 months ago
- RNA-seq prediction with deep convolutional neural networks.☆254Aug 28, 2025Updated 10 months ago
- single-cell latent diffusion model☆57Jul 13, 2026Updated last week
- Pangenome file formats based on SQLite☆15Updated this week
- Pangenome-Informed Genome Assembly (PIGA) workflow for population-scale diploid genome assembly☆41Apr 16, 2026Updated 3 months ago
- Official Implementation of the paper "Variational Control for Guidance in Diffusion Models" accepted at ICML'25☆20Dec 5, 2025Updated 7 months ago
- For fine-tuning Enformer using paired WGS & gene expression data☆32Aug 27, 2025Updated 10 months ago
- This tools counts the number of specific k-mers within sequence data. The counts can then be compare to other counts to determine to comp…☆32Nov 25, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆19May 30, 2026Updated last month
- ☆99Apr 3, 2026Updated 3 months ago
- A machine learning-based genotyping tool for structural variation in short reads☆27Sep 15, 2025Updated 10 months ago
- ☆19Jun 11, 2026Updated last month
- ☆34Jan 27, 2025Updated last year
- [ICLR 2026] A framework to "create benchmarks" and "evaluate AI co-scientists" in experimental data-driven real-world scientific research…☆15Feb 16, 2026Updated 5 months ago
- Valid and Powerful Machine-Learning-Assisted Genetic Association Studies