VariantFormer: A hierarchical transformer integrating DNA sequences with genetic variations
☆31May 3, 2026Updated last month
Alternatives and similar repositories for variantformer
Users that are interested in variantformer are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆17May 14, 2026Updated 3 weeks ago
- Framework for working with brat-annotated .ann files☆10Mar 16, 2026Updated 2 months ago
- A Cellular Regulatory Network-Aware Transcriptomics Foundation Model☆37Dec 18, 2025Updated 5 months ago
- Estimate PTM hotspots in protein sequence alignments☆15Feb 6, 2019Updated 7 years ago
- C++ lossless and lossy mass spectrometry compression☆15Sep 16, 2021Updated 4 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Metal and Water prediction☆14Feb 5, 2025Updated last year
- Eine Liste aller Gemeinden Österreichs inklusive ihrer Homepages & E-Mailadressen☆17Aug 16, 2022Updated 3 years ago
- Tool for analyzing clusters of genes using LLM providers.☆30May 26, 2026Updated 2 weeks ago
- GatorAffinity: Boosting Protein-Ligand Binding Affinity Prediction with Large-Scale Synthetic Structural Data☆35Apr 10, 2026Updated last month
- ☆12Jan 14, 2023Updated 3 years ago
- Find hot data sets in your area (of research)!☆16Dec 20, 2018Updated 7 years ago
- Deep learning + physical modeling for 3D protein metal ion binding prediction☆14Feb 24, 2025Updated last year
- Cell cycle analysis of single-cell proteomic and transcriptomic data for the FUCCI cell model☆14Oct 19, 2023Updated 2 years ago
- ☆15Jun 15, 2020Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Mapping 3′UTR alternative polyadenylation quantitative trait loci through population-scale transcriptomic and genomic data☆15Mar 15, 2023Updated 3 years ago
- Fourier analysis and subtomogram averaging of heterogenic cylindrical structures☆17May 25, 2026Updated 2 weeks ago
- A pipeline to transform images into valuable analysis items☆19May 26, 2026Updated 2 weeks ago
- A GitHub action to install Nextflow☆29Updated this week
- PhosR is a package for the comprehensive analysis of phosphoproteomic data.☆20Sep 4, 2025Updated 9 months ago
- SMR-Portal: an online platform for integrative analysis of GWAS and xQTL data to identify complex trait genes.☆23Dec 2, 2025Updated 6 months ago
- BioMetAll is a command line application to allow the identification of metal-binding sites in proteins from backbone preorganization.☆13May 10, 2024Updated 2 years ago
- ☆11Jun 3, 2025Updated last year
- Weekly Vibecast Live coding sessions with rUv. Check branches for each week.☆42Feb 22, 2026Updated 3 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ☆13Mar 17, 2026Updated 2 months ago
- Design and documentation for the 2p microscope.☆17Feb 20, 2025Updated last year
- Minimal example shiny app for the scatterD3 package : https://github.com/juba/scatterD3☆13Apr 10, 2019Updated 7 years ago
- Prion-Like Amino Acid Composition☆18Dec 15, 2025Updated 5 months ago
- ClinicoPath jamovi Module☆21Jun 1, 2026Updated last week
- CliXO algorithm re-implemented☆16Nov 9, 2021Updated 4 years ago
- SigProfilerTopography allows evaluating the effect of chromatin organization, histone modifications, transcription factor binding, DNA re…☆24May 21, 2026Updated 2 weeks ago
- A Rust-Based suite of utilities for ultra-fast genomic feature extraction☆43Dec 18, 2025Updated 5 months ago
- longcallR is a tool for SNP calling, haplotype phasing, and allele-specific analysis with long-read RNA-seq data.☆92Apr 16, 2026Updated last month
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Transposable element databases☆16Apr 7, 2022Updated 4 years ago
- Used to deisotope mass spectra and to detect features from mass spectrometry data using observed isotopic signatures.☆20Oct 23, 2025Updated 7 months ago
- A Zod Implementation in Rust☆49Apr 12, 2026Updated last month
- RNA Structural Covariation Above Phylogenetic Expectation☆19May 30, 2026Updated last week
- ThreeJS audio visualizer☆23Sep 20, 2018Updated 7 years ago
- High throughput tool for tall and wide multiple sequence alignment.☆30Apr 28, 2026Updated last month
- CIViC is an open access, open source, community-driven web resource for Clinical Interpretation of Variants in Cancer☆32Jun 2, 2026Updated last week