haddocking / BM5-cleanLinks
Docking benchmark 5 - cleaned and ready to use for HADDOCK
☆14Updated this week
Alternatives and similar repositories for BM5-clean
Users that are interested in BM5-clean are comparing it to the libraries listed below
Sorting:
- software used in paper "Antibody interface prediction with 3D Zernike descriptors and SVM"☆13Updated 4 years ago
- DLPacker☆31Updated last year
- An open-source library for the analysis of protein interactions.☆29Updated 3 years ago
- A deep learning framework for predicting interactions between protein-protein interaction targets and modulators☆14Updated last year
- ☆42Updated last year
- A surface-based deep learning approach for the prediction of ligand binding sites on proteins☆44Updated 2 years ago
- A multiple-layer inter-molecular contact features based deep neural network for protein-ligand binding affinity prediction☆81Updated 4 years ago
- Calculation of interatomic interactions in molecular structures☆80Updated 3 years ago
- De novo design of small molecule binding sites into proteins☆12Updated 4 years ago
- Analysis of contacts in molecular dynamics trajectories☆43Updated 5 years ago
- Create or modify Rosetta params files (topology files) from scratch, RDKit mols or another params file☆34Updated 2 months ago
- ☆25Updated 3 years ago
- ☆29Updated 5 years ago
- Automatic Retrieval and ClusTering of Interfaces in Complexes from 3D structural information☆31Updated last month
- ☆38Updated 4 years ago
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆39Updated last year
- Physical energy function for protein sequence design☆33Updated 2 years ago
- Datasets for P2Rank project. https://github.com/rdk/p2rank☆24Updated 10 months ago
- Improving protein–ligand docking and screening accuracies by incorporating a scoring function correction term☆28Updated 9 months ago
- Fraction of Common Contacts Clustering Algorithm for Protein Structures☆27Updated 4 years ago
- iScore: an MPI supported software for ranking protein-protein docking models based on a random walk graph kernel and support vector machi…☆31Updated 3 years ago
- Computer aided proximal decaging as a universal strategy for temporal protein activation☆24Updated 3 months ago
- Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).☆35Updated 5 years ago
- ☆35Updated 3 years ago
- Rosetta FunFolDes – a general framework for the computational design of functional proteins.☆21Updated 6 years ago
- DLSCORE: A deep learning based scoring function for predicting protein-ligand binding affinity☆48Updated 2 years ago
- ☆26Updated last month
- Improved ab initio protein structure reconstruction☆15Updated 7 years ago
- Modelling protein conformational landscape with Alphafold☆52Updated 2 weeks ago
- FreeSASA Python Module☆56Updated last month