Framework for building fast genomics web tools with WebAssembly and WebWorkers
☆118Feb 28, 2026Updated this week
Alternatives and similar repositories for aioli
Users that are interested in aioli are comparing it to the libraries listed below
Sorting:
- WebAssembly modules for genomics☆265Feb 26, 2026Updated last week
- An interactive web tool for quality control of DNA sequencing data☆105Aug 30, 2024Updated last year
- Cython API for the Mutation Annotated Tree (MAT) Online Phylogenetics Toolkit☆14May 28, 2025Updated 9 months ago
- Read Tabix-indexed files, either with .tbi or .csi indexes, in node or the browser☆14Dec 24, 2025Updated 2 months ago
- Multiple sequence alignment browser☆11Dec 12, 2022Updated 3 years ago
- An efficient CLI to extract sequences from the SRA☆121Jan 30, 2026Updated last month
- integrative pathway analysis with modern PCA methodology and gene selection☆11Jun 29, 2023Updated 2 years ago
- command-line and python interface to the uniprot database☆10Jun 11, 2015Updated 10 years ago
- Per-base per-nucleotide depth analysis☆146Feb 4, 2026Updated last month
- Bioinformatics I/O libraries in Rust☆655Updated this week
- Single-Cell RNA-seq pseudo-aligner☆52May 6, 2024Updated last year
- PCA in rust☆16Jul 30, 2023Updated 2 years ago
- convert alignment bam to pairwise alignment or multiple sequence alignment (msa) at genome specific region☆13May 21, 2024Updated last year
- Fast interval intersection library☆44Aug 20, 2025Updated 6 months ago
- Mantis: A Fast, Small, and Exact Large-Scale Sequence-Search Index☆86Mar 7, 2024Updated last year
- Fast FASTX parsing and k-mer methods in Rust☆210Jan 27, 2026Updated last month
- Experiments with using BIGSI data structure for metagenomic and QC applications☆19Aug 12, 2024Updated last year
- Web application to collect and visualise data across multiple MultiQC runs.☆95Dec 13, 2024Updated last year
- Python and Rust library for loading, saving, and manipulating taxonomic trees☆51Feb 20, 2026Updated last week
- R Interface to the NCBI SRA metadata☆23Nov 19, 2018Updated 7 years ago
- The D4 Quantitative Data Format☆169Nov 28, 2025Updated 3 months ago
- Human Primary T cells: A Practical Guide☆15Sep 18, 2018Updated 7 years ago
- Single Cell Multiplexed Imaging Jupyter Voila Dashboard using CODEX Data☆17Jul 6, 2023Updated 2 years ago
- Bam Read Index - Extract alignments from a bam file by readname☆28Apr 22, 2024Updated last year
- expressions on VCFs☆91Apr 19, 2025Updated 10 months ago
- Grammar of Scalable Linked Interactive Nucleotide Graphics☆181Feb 20, 2026Updated last week
- Build an index for your BAM Index (BAI)☆17Apr 14, 2015Updated 10 years ago
- ☆18Jul 9, 2018Updated 7 years ago
- Library for visualising genomic features in Python.☆15May 12, 2017Updated 8 years ago
- A graph-inspired data structure for determining likely chains of sequences from breadcrumbs of evidence☆17Jun 29, 2021Updated 4 years ago
- HyGen: Compact and Efficient Genome Sketching using Hyperdimensional Vectors☆30Aug 26, 2024Updated last year
- Bioinformatic infrastructure libraries☆78Aug 18, 2020Updated 5 years ago
- A genomic minhashing implementation in Rust☆102Jun 17, 2025Updated 8 months ago
- Introduction to Computational Biology☆33Nov 15, 2024Updated last year
- This library provides HTSlib bindings and a high level Rust API for reading and writing BAM files.☆361Jan 29, 2026Updated last month
- ☆52Sep 20, 2022Updated 3 years ago
- A Go implementation of the strobemers (https://github.com/ksahlin/strobemers)☆14Apr 23, 2021Updated 4 years ago
- BED QC tool (in the making)☆18Aug 19, 2022Updated 3 years ago
- BAM CIGAR / MD transcoder for compact on-memory representation and quick drawing☆20Jul 19, 2023Updated 2 years ago