Alternatives and similar repositories for aioli:

Users that are interested in aioli are comparing it to the libraries listed below

• robertaboukhalil / fastq.bio
  An interactive web tool for quality control of DNA sequencing data
  ☆103Updated 4 months ago
• biowasm / biowasm
  WebAssembly modules for genomics
  ☆228Updated last month
• mlin / GenomicSQLite
  Genomics Extension for SQLite
  ☆162Updated 4 months ago
• lskatz / fasten
  Fasten toolkit, for streaming operations on fastq files
  ☆77Updated this week
• broadinstitute / viral-pipelines
  viral-ngs: complete pipelines
  ☆61Updated this week
• broadinstitute / wdl-ide
  Rich IDE support for Workflow Description Language
  ☆42Updated 6 months ago
• varlociraptor / varlociraptor
  Flexible, uncertainty-aware variant calling with parameter free filtration via FDR control.
  ☆122Updated this week
• 3DGenomes / TADkit
  3D Genome Browser
  ☆31Updated 2 years ago
• slowkow / pytabix
  Retrieve data in genomic intervals with a Python interface for tabix.
  ☆83Updated 7 years ago
• broadinstitute / gnomad-browser
  Explore gnomAD datasets on the web
  ☆81Updated this week
• genome-spy / genome-spy
  A visualization grammar and GPU-accelerated toolkit for genomic data
  ☆179Updated 3 weeks ago
• mskilab-org / gGnome.js
  ☆26Updated 2 years ago
• hms-dbmi / cistrome-explorer
  Interactive visual analytic tool for exploring epigenomics data w/ associated metadata, powered by HiGlass and Gosling
  ☆13Updated last year
• tleonardi / nanocompore
  RNA modifications detection from Nanopore dRNA-Seq data
  ☆81Updated 11 months ago
• stjude-rust-labs / fq
  Command line utility for manipulating Illumina-generated FASTQ files.
  ☆78Updated last month
• mrvollger / rustybam
  bioinformatics toolkit in rust
  ☆86Updated 8 months ago
• EliLillyCo / pytest-wdl
  WDL plugin for pytest
  ☆48Updated last year
• arq5x / cyvcf
  A fast Python library for VCF files leveraging Cython for speed.
  ☆52Updated 6 years ago
• iobio / gene.iobio
  Gene.iobio vue
  ☆57Updated last month
• nspies / genomeview
  An extensible python-based genomics visualization engine
  ☆143Updated last year
• marcelm / dnaio
  Efficiently read and write sequencing data from Python
  ☆61Updated 2 months ago
• lh3 / biofast
  Benchmarking programming languages/implementations for common tasks in Bioinformatics
  ☆180Updated 3 years ago
• openwdl / learn-wdl
  Educational materials for learning WDL
  ☆126Updated 10 months ago
• dnanexus / dxWDL
  Workflow Description Language compiler for the DNAnexus platform
  ☆40Updated last year
• igvteam / igv-webapp
  IGV Web App
  ☆119Updated this week
• GeneDx / pgr-tk
  PGR-TK: Pangenome Research Tool Kit
  ☆96Updated 8 months ago
• TileDB-Inc / TileDB-VCF
  Efficient variant-call data storage and retrieval library using the TileDB storage library.
  ☆91Updated last week
• COMBINE-lab / pufferfish
  An efficient index for the colored, compacted, de Bruijn graph
  ☆108Updated 3 months ago
• dcjones / coitrees
  A very fast interval tree data structure
  ☆113Updated 7 months ago
• sstadick / perbase
  Per-base per-nucleotide depth analysis
  ☆122Updated this week