theosanderson / chronumentalLinks
Estimating time trees from very large phylogenies
☆28Updated last year
Alternatives and similar repositories for chronumental
Users that are interested in chronumental are comparing it to the libraries listed below
Sorting:
- Fast, scalable, accurate and accessible Bayesian phylogenetics☆40Updated 2 weeks ago
- Scalable relaxed clock phylogenetic dating☆27Updated 3 months ago
- ☆20Updated 8 months ago
- ☆18Updated 2 months ago
- ☆11Updated 10 months ago
- Phylodynamic inference☆21Updated 5 years ago
- ☆19Updated last year
- Metagenomics calibration R package☆20Updated 3 years ago
- Consensus sequences for U.S. H5N1 clade 2.3.4.4b☆36Updated this week
- Bacterial phylogenetics in BEAST 2.☆18Updated 2 years ago
- Reconstruction of transmission trees using genomic data☆69Updated 2 years ago
- A phylogeny dating method using least-squares algorithms and criteria☆32Updated last year
- Tool for visualising viral lineages in space and time. As seen on covid19.sanger.ac.uk and covglobe.org.☆10Updated 3 years ago
- ☆21Updated 3 weeks ago
- Working with the outputs of sourmash in R☆28Updated 2 years ago
- Predicting Absolute and Relative Abundance by Modeling Efficiency to Derive Intervals and Concentrations☆14Updated last month
- ☆19Updated 4 years ago
- Real time and remote MCMC trace monitoring with BEASTIARY.☆21Updated 7 months ago
- ☆12Updated 6 years ago
- Cluster Investigation & Virus Epidemiology Tool☆50Updated 6 months ago
- R We There Yet?☆32Updated 9 months ago
- Leaping through tree space: continuous phylogenetic inference for rooted and unrooted trees☆12Updated 2 years ago
- Phylogenetic inference using Stan☆23Updated 9 months ago
- Coalescent simulation and likelihood for phylodynamic inference☆14Updated 7 months ago
- Calculate distances between phylogenetic trees in R☆35Updated last month
- Rapid analysis and visualization of coronavirus genome variation☆48Updated 3 weeks ago
- ☆16Updated this week
- From genomes to phenotypes: Traitar3, the microbial trait analyzer (for Python3)☆21Updated last year
- Phylogenetic maximum representation sampling: choosing most representative strains or taxa☆40Updated 3 months ago
- Java software to analyse phylogeny-trait correlations in discrete traits, accounting for phylogenetic uncertainty via posterior sampling.☆12Updated 8 years ago