Registry of containerized biosimulation tools that support a standard command-line interface
☆14Feb 16, 2026Updated last week
Alternatives and similar repositories for Biosimulators
Users that are interested in Biosimulators are comparing it to the libraries listed below
Sorting:
- Ontology of algorithms for analyzing biological models, their parameters, and their outputs☆11Dec 2, 2024Updated last year
- A platform for sharing and reusing biomodeling studies including models, simulations, and visualizations of their results☆42Updated this week
- The SBML Test Suite is a conformance testing system. It allows developers and users to test the degree and correctness of the SBML suppor…☆26Dec 3, 2025Updated 2 months ago
- ModelPolisher accesses the BiGG Models knowledgebase to annotate SBML models.☆23Jan 28, 2025Updated last year
- Rule-based modeling framework☆66Updated this week
- BMI prediction from human photograph☆11Sep 14, 2021Updated 4 years ago
- Python library & CLI to create, view and edit PFB files☆12Feb 19, 2026Updated last week
- Python interface for running COMETS simulations and analyzing the results☆15Updated this week
- ☆34Updated this week
- A Google Assistant Assistant☆12Aug 13, 2020Updated 5 years ago
- the MAVISp database for annotations and predictions of variant effects at the protein level☆13Feb 19, 2026Updated last week
- A potential solution to the early-stage small molecule hit identification☆14Jan 27, 2026Updated last month
- Lezer grammar support for VS Code.☆11Feb 16, 2021Updated 5 years ago
- SBGN User Website and Developer Wiki (outdated version of the website)☆13Jan 20, 2023Updated 3 years ago
- Remote Monitoring Aids☆10Jan 18, 2017Updated 9 years ago
- ☆12Jan 7, 2025Updated last year
- ☆21Dec 20, 2025Updated 2 months ago
- ☆21Apr 2, 2025Updated 10 months ago
- PathRAG System - A Path-based Retrieval-Augmented Generation implementation with knowledge graph visualization and Ollama integration for…☆13Mar 3, 2025Updated 11 months ago
- Deep Origin CLI and Python client☆14Updated this week
- Awesome list for Computational Physiology☆10Oct 29, 2025Updated 4 months ago
- Automated property management and interactive relationship visualization for Obsidian — bidirectional sync, graph views, and intelligent …☆35Updated this week
- Model selection for PEtab☆14Dec 16, 2025Updated 2 months ago
- Słownik polskich odmian dla Sphinx☆13Feb 8, 2025Updated last year
- ☆10Dec 15, 2023Updated 2 years ago
- ⚡Unofficial cross-platform desktop app to monitor and control Tesla vehicles, powered by Electron & React☆12Dec 24, 2019Updated 6 years ago
- The Systems Biology Ontology (SBO) is a set of controlled, relational vocabularies of terms commonly used in Systems Biology, and in part…☆11May 16, 2023Updated 2 years ago
- freifunk-flyer 6 Seitig☆14Apr 3, 2019Updated 6 years ago
- Leaguerunner is a web-based application for managing scheduling, score submission and standings for an Ultimate Frisbee league.☆15Feb 6, 2013Updated 13 years ago
- Java SDK for Orvibo devices☆11Sep 11, 2018Updated 7 years ago
- Rule-Based Modeling and Simulation Gui☆12Jun 12, 2020Updated 5 years ago
- Attempt to replicate an Ikea Ansluta remote using Raspberry Pi, CC2500 and Java☆14Aug 2, 2018Updated 7 years ago
- Python package for building SBML models without needing to use libSBML.☆11Aug 18, 2021Updated 4 years ago
- MCP server that transforms your Obsidian vault into an intelligent knowledge system☆34Dec 16, 2025Updated 2 months ago
- Based off of the official Rostlab & PredictProtein website installation, as of 2020-09-07, the produced Docker image from this repository…☆14Feb 13, 2023Updated 3 years ago
- Yeoman Action Generator for generating a fulfillment code of an action for Google Assistant.☆11Apr 14, 2019Updated 6 years ago
- ☆23Nov 14, 2025Updated 3 months ago
- On-demand MCP tool discovery for AI agents☆24Feb 8, 2026Updated 3 weeks ago
- A web technologies based Setup & Maintenance user interface for OHX☆10Dec 30, 2022Updated 3 years ago