☆11Dec 15, 2023Updated 2 years ago
Alternatives and similar repositories for dGPredictor
Users that are interested in dGPredictor are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- novoStoic2.0: Integrated Pathway Design Tool with Thermodynamic Considerations and Enzyme Selection☆11Apr 28, 2025Updated last year
- A compact metabolic model of Escherichia Coli core and biosynthetic metabolism☆14Mar 17, 2026Updated 7 months ago
- Dynamic FBA for use with COBRApy metabolic models☆10Sep 26, 2023Updated 3 years ago
- A constraint-based method for prediction of metabolic engineering targets using ecModels of metabolism☆15Feb 12, 2025Updated last year
- ☆24Oct 11, 2024Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆20Jun 20, 2022Updated 4 years ago
- ☆16May 8, 2026Updated 5 months ago
- Uncover organisms' metabolic blueprints☆18Jun 18, 2024Updated 2 years ago
- Python-code to analyse Raman spectroscopy☆15Apr 19, 2019Updated 7 years ago
- Variational Auto Encoders for learning binding signatures of transcription factors☆15Mar 14, 2024Updated 2 years ago
- Generate biomass objective function stoichiometric coefficients for genome-scale models from experimental data☆28Jul 6, 2023Updated 3 years ago
- Metagenomics workflow from sequencing data to Metagenome-Assembled Genomes (MAGs)☆11May 27, 2022Updated 4 years ago
- COnstraint Based Reconstruction and EXascale Analysis (in Julia)☆20Sep 26, 2025Updated last year
- DeGAML-LLM: Decoupling Generalization and Adaptation in Meta-Learning for Large Language Models☆19Jan 8, 2026Updated 9 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Repository for c++ sample codes and descriptions for C++☆38Oct 7, 2026Updated 3 weeks ago
- Python, modeling and Flux balance analysis tutorials for the undergraduate Systems Biology course in Amsterdam☆14Jun 30, 2019Updated 7 years ago
- Software tool for metabolic modelling in Systems Biology☆10Jul 24, 2026Updated 3 months ago
- Build-A-Cell protocol for making liposomes☆13Jan 30, 2024Updated 2 years ago
- A general-purpose, stochastic, biochemical reaction simulator for large reaction networks☆17Oct 19, 2026Updated last week
- ☆19May 8, 2024Updated 2 years ago
- A general implementation of cosmo-sac models☆10Feb 26, 2021Updated 5 years ago
- ☆15Jan 21, 2025Updated last year
- You can download wolfram mathematica here☆10Jul 30, 2022Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A curated biochemical database that integrates and refines data from KEGG and ATLAS databases to support precise analyses of biochemical …☆16May 13, 2026Updated 5 months ago
- Virtual container environments with Singularity or Shifter☆12Oct 14, 2026Updated 2 weeks ago
- A collection of ODE models with experimental data as benchmark problems in order to evaluate new and existing methodologies for data-base…☆11Feb 14, 2019Updated 7 years ago
- StrainDesign is a python package for the computational design of metabolic networks and based on COBRApy☆53Oct 7, 2026Updated 3 weeks ago
- Python implementation of various 2D and 3D compactness measures.☆10Aug 17, 2022Updated 4 years ago
- Enzyme-constrained genome-scale models in python☆39Oct 25, 2023Updated 3 years ago
- CombiFF: automatized force-field optimization by the CSMS group at ETH Zürich☆19Sep 19, 2022Updated 4 years ago
- Python library & CLI to create, view and edit PFB files☆14Sep 22, 2026Updated last month
- ☆10May 16, 2024Updated 2 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Retrieves kcat data and adds protein allocation constraints to stoichiometric metabolic models according to the sMOMENT method. Also chec…☆17Feb 28, 2025Updated last year
- libRoadRunner: A high-performance SBML simulator☆64Updated this week
- Deep learning and Bayesian approach applied to enzyme turnover number for the improvement of enzyme-constrained genome-scale metabolic mo…☆207Jul 4, 2023Updated 3 years ago
- ☆10Mar 17, 2021Updated 5 years ago
- This is an updated version of the MolecularTransformer of Schwaller et. al.☆14Jan 17, 2022Updated 4 years ago
- annotating microbial co-occurrence networks☆12Oct 17, 2026Updated last week
- GPRuler, an open-source computational framework to automate the reconstruction process of Gene-Protein-Reaction (GPR) rules within metabo…☆13Oct 11, 2022Updated 4 years ago