Alternatives and similar repositories for stitcher

Users that are interested in stitcher are comparing it to the libraries listed below

• biopragmatics / biomappings
  🗺️ Community curated and predicted equivalences and related mappings between named biological entities that are not available from prima…
  ☆55Updated this week
• obophenotype / provisional_cell_ontology
  Draft cell type definitions from data - candidates for inclusion in CL
  ☆12Updated 5 months ago
• biopragmatics / bioversions
  🪝 What's the latest version for each database?
  ☆27Updated this week
• monarch-initiative / monarchr
  R package for easy access, manipulation, and analysis of the Monarch Initiative or other KGX-formatted knowledge graphs.
  ☆14Updated 2 weeks ago
• phenopackets / phenopacket-tools
  An app and library for building, conversion, and validation of GA4GH Phenopackets.
  ☆16Updated last month
• microbiomedata / nmdc-schema
  National Microbiome Data Collaborative (NMDC) unified data model
  ☆33Updated this week
• EBISPOT / efo
  Github repo for the Experimental Factor Ontology (EFO)
  ☆58Updated last week
• CLO-ontology / CLO
  Communitiy-based Cell Line Ontology
  ☆18Updated last year
• evidenceontology / evidenceontology
  Evidence & Conclusion Ontology development site: Use ISSUES to request terms. See WIKI for how to request terms. See README for how to c…
  ☆50Updated last month
• biopragmatics / pyobo
  📛 A Python package for using ontologies, terminologies, and biomedical nomenclatures
  ☆69Updated last week
• Knowledge-Graph-Hub / kg-obo
  A package to transform all OBO ontologies into KGX TSV format and OBO json, and put the transformed graph in KGhub
  ☆32Updated last year
• monarch-initiative / biolink-api
  API for linked biological knowledge
  ☆64Updated 3 years ago
• biopragmatics / bioregistry
  📮 An integrative registry of biological databases, ontologies, and nomenclatures.
  ☆131Updated this week
• opentargets / OnToma
  Map your disease and phenotype terms to the Open Targets platform ontology
  ☆21Updated this week
• OntoGene / OGER
  ☆24Updated 4 years ago
• monarch-initiative / dipper
  Data Ingestion Pipeline for Monarch
  ☆57Updated 2 years ago
• elixir-europe / BioHackathon-projects-2020
  This repository is meant for the participants of the BioHackathon hosted in Barcelona in Nov 2020 to share ideas, create issues, manage p…
  ☆22Updated 2 years ago
• dhimmel / integrate
  Scripts and resources to create Hetionet v1.0, a heterogeneous network for drug repurposing
  ☆32Updated 7 years ago
• monarch-initiative / phenomics-assistant
  LLM retrieval augmented generation agent for the Monarch Knowledge graph.
  ☆24Updated last week
• EBISPOT / OXO
  Ontology cross-reference and mapping service
  ☆19Updated last month
• biothings / biothings.api
  BioThings API framework - Making high-performance API for biological annotation data
  ☆47Updated this week
• mapping-commons / mh_mapping_initiative
  Repo to organise the mouse-human phenotype mapping initiative and reconcile resources.
  ☆13Updated last week
• monarch-initiative / monarch-ingest
  Data ingest application for Monarch Initiative knowledge graph using Koza
  ☆17Updated this week
• fastobo / fastobo-py
  Faultless AST for Open Biomedical Ontologies in Python.
  ☆29Updated last month
• PROconsortium / PRoteinOntology
  ☆15Updated this week
• monarch-initiative / oai-monarch-plugin
  First pass at a thin wrapper around the Monarch API and ChatGPT plugin
  ☆12Updated 3 months ago
• RTXteam / RTX
  Software repo for Team Expander Agent (Oregon State U., Institute for Systems Biology, and Penn State U.)
  ☆35Updated this week
• monarch-initiative / monarch-app
  Monarch Initiative website and API
  ☆26Updated this week
• bio2bel / bio2bel
  A Python framework for integrating biological databases and structured data sources in Biological Expression Language (BEL)
  ☆21Updated 3 years ago
• Xomics / FAIRDataCube
  Design and implementation of FAIR Data Cube
  ☆11Updated 3 weeks ago