jeremyjyang / BioClients
Python package for access to online biomedical resources, usually via REST APIs.
☆14Updated 2 weeks ago
Related projects: ⓘ
- Repository for storing code related to the paper by Zdrazil B., Richter L., Brown N., and Guha R. "Moving Targets: Monitoring Target Tren…☆9Updated 3 years ago
- 🪝 What's the latest version for each database?☆26Updated this week
- A Knowledge Graph from public databases and scientific literature to extract associations between chemicals and diseases.☆14Updated 2 months ago
- Network representation learning on drug-target-side effects-indication graphs for side effect prediction☆12Updated 4 years ago
- A database of paths that represent the mechanism of action from a drug to a disease in an indication.☆54Updated 11 months ago
- Cataloging pharmacotherapies in clinical trial from ClinicalTrials.gov☆25Updated 8 years ago
- A Standard Database for Drug Repositioning☆17Updated 7 years ago
- DTO ontology files☆8Updated 6 years ago
- The Clinical Trials Knowledge Graph☆48Updated last year
- A Bio2BEL package for DrugBank (https://www.drugbank.ca)☆9Updated 3 years ago
- Adverse Outcome Pathway Ontology☆11Updated 5 months ago
- BioDWH2 is an easy-to-use, automated, graph-based data warehouse and mapping tool for bioinformatics and medical informatics.☆13Updated 3 weeks ago
- ☆13Updated last week
- ☆20Updated last year
- ☆11Updated 4 years ago
- Scripts and resources to create Hetionet v1.0, a heterogeneous network for drug repurposing☆31Updated 6 years ago
- 📖 Generation and Applications of Knowledge Graphs in Systems and Networks Biology☆29Updated 4 years ago
- PyBioPAX: A python implementation of the BioPAX object model☆23Updated 4 months ago
- Food-Biomarker Ontology defines the relationships between foods and their associated metabolites (biomarkers) through a formal ontology☆16Updated 2 years ago
- biochem4j: integrated and extensible biochemical knowledge through graph databases☆12Updated 6 years ago
- A Python framework for integrating biological databases and structured data sources in Biological Expression Language (BEL)☆21Updated 2 years ago
- A Python package for drug discovery by analyzing causal paths on multiscale networks☆27Updated 2 months ago
- ☆13Updated 2 years ago
- Ten quick tips to finish that manuscript that's 90% complete.☆13Updated 2 years ago
- Protein Graph in Python for MetaPath-ML and more.☆17Updated 2 years ago
- Computational Analysis of Novel Drug Opportunities☆35Updated last month
- TargetDB is a tool to quickly querry multiple publicly available databases and provide an integrated view of the information available ab…☆27Updated 2 months ago
- Software "Disease_ontologies_for_knowledge_graphs" - a knowledge base solution that uses Grakn core and disease ontologies cross-referenc…☆20Updated 3 years ago
- A Data-Driven Approach to Predicting Successes and Failures of Clinical Trials☆17Updated 4 years ago
- An Online Tool for the Real-Time Kinetic Analysis of Binding Events☆12Updated last month