RTXteam / RTXLinks
Software repo for Team Expander Agent (Oregon State U., Institute for Systems Biology, and Penn State U.)
โ38Updated this week
Alternatives and similar repositories for RTX
Users that are interested in RTX are comparing it to the libraries listed below
Sorting:
- ๐บ๏ธ Community curated and predicted equivalences and related mappings between named biological entities that are not available from primaโฆโ56Updated 2 weeks ago
- Github repo for the Experimental Factor Ontology (EFO)โ58Updated this week
- PheKnowLator: Heterogeneous Biomedical Knowledge Graphs and Benchmarks Constructed Under Alternative Semantic Modelsโ194Updated last year
- ๐ฎ An integrative registry of biological databases, ontologies, and nomenclatures.โ132Updated this week
- Map your disease and phenotype terms to the Open Targets platform ontologyโ21Updated last month
- The Unified Phenotype Ontology (uPheno) integrates multiple phenotype ontologies into a unified cross-species phenotype ontology.โ79Updated last week
- A package to transform all OBO ontologies into KGX TSV format and OBO json, and put the transformed graph in KGhubโ32Updated last year
- API for linked biological knowledgeโ65Updated 3 years ago
- python library for working with ontologies and ontology associationsโ128Updated 5 months ago
- โ24Updated 4 years ago
- ๐ช What's the latest version for each database?โ27Updated this week
- A collection of useful python functions for looking up information and working with the Biolink Modelโ24Updated last month
- ๐ A Python package for using ontologies, terminologies, and biomedical nomenclaturesโ71Updated last week
- NCATS Biomedical Translator Reasoners Standard APIโ37Updated 2 months ago
- A stitching platform for InXightโ15Updated 4 months ago
- Schema and generated objects for biolink data model and upper ontologyโ201Updated this week
- LLM retrieval augmented generation agent for the Monarch Knowledge graph.โ24Updated last month
- OBO-formatted ontologies โ networkx (Python 3)โ142Updated 4 months ago
- Repo to organise the mouse-human phenotype mapping initiative and reconcile resources.โ13Updated last week
- An app and library for building, conversion, and validation of GA4GH Phenopackets.โ16Updated last month
- OMOP2OBO: A Python Library for mapping OMOP standardized clinical terminologies to Open Biomedical Ontologiesโ89Updated last year
- An ontology of cell typesโ180Updated this week
- NetworkX-based Python library for representing ontologiesโ90Updated 2 years ago
- ๐ก Unified access to OLS instances like from the EBI and TIBโ13Updated last week
- Ontology cross-reference and mapping serviceโ19Updated 3 months ago
- Communitiy-based Cell Line Ontologyโ18Updated last year
- Data Ingestion Pipeline for Monarchโ57Updated 2 years ago
- Mondo Disease Ontologyโ262Updated this week
- A Python framework for integrating biological databases and structured data sources in Biological Expression Language (BEL)โ21Updated 3 years ago
- Build PharMeBINet from different sources.โ19Updated last week