Alternatives and similar repositories for biohackathon-projects-2023

Users that are interested in biohackathon-projects-2023 are comparing it to the libraries listed below

• ncats / stitcher
  A stitching platform for InXight
  ☆15Updated 5 months ago
• opentargets-archive / opentargets-py
  Python client for the Open Targets REST API at targetvalidation.org
  ☆25Updated last week
• reactome / reactome2py
  python client for reactome content, analysis, and human functional protein interactions (FI) services api calls.
  ☆33Updated last year
• biopragmatics / bioversions
  🪝 What's the latest version for each database?
  ☆27Updated this week
• monarch-initiative / biolink-api
  API for linked biological knowledge
  ☆65Updated 3 years ago
• PathwayMerger / PathMe
  Harmonizing pathway databases using Biological Expression Language (BEL)
  ☆20Updated last year
• ablab / npdtools
  Natural Product Discovery tools -- a toolkit containing various pipelines for in silico analysis of natural product mass spectrometry da…
  ☆28Updated 3 years ago
• chembl / tractability_pipeline_v2
  Pipeline for assessing the tractability of potential targets (starting from Gene IDs)
  ☆27Updated 6 months ago
• esacinc / PDC-Public
  The public repository for the Proteomic Data Commons UI and APIs
  ☆16Updated last year
• biopragmatics / biomappings
  🗺️ Community curated and predicted equivalences and related mappings between named biological entities that are not available from prima…
  ☆57Updated last month
• biopragmatics / bioregistry
  📮 An integrative registry of biological databases, ontologies, and nomenclatures.
  ☆133Updated this week
• tyo-nu / MINE-Database
  Metabolic In silico Network Expansion (MINE) Database Construction and DB Logic
  ☆20Updated last year
• obophenotype / provisional_cell_ontology
  Draft cell type definitions from data - candidates for inclusion in CL
  ☆12Updated last month
• gyorilab / pybiopax
  PyBioPAX: A python implementation of the BioPAX object model
  ☆24Updated last year
• biothings / biothings.api
  BioThings API framework - Making high-performance API for biological annotation data
  ☆47Updated last week
• siheming / mspypeline
  Package to analyze Mass Spec Data
  ☆12Updated 2 years ago
• research-software-ecosystem / content
  A metadata commons to store research software metadata
  ☆41Updated last week
• ylaboratory / gene-embedding-benchmarks
  Benchmarking gene embeddings on single, paired, and gene set tasks
  ☆13Updated 3 weeks ago
• cusbg / MolArt
  MOLeculAR structure annoTator
  ☆34Updated 10 months ago
• bihealth / sodar-server
  SODAR: System for Omics Data Access and Retrieval
  ☆15Updated this week
• cebel / pyuniprot
  Python package to query and analyse UniProt
  ☆25Updated 4 years ago
• dhimmel / integrate
  Scripts and resources to create Hetionet v1.0, a heterogeneous network for drug repurposing
  ☆32Updated 7 years ago
• ebi-uniprot / ProtVista
  A BioJS viewer for protein sequence features
  ☆51Updated 2 years ago
• bio-tools / biotoolsRegistry
  biotoolsregistry : discovery portal for bioinformatics
  ☆80Updated last week
• mwang87 / MassQueryLanguage
  The Mass Spec Query Language (MassQL) is a domain specific language meant to be a succinct way to express a query in a mass spectrometry …
  ☆54Updated 2 weeks ago
• AnacletoLAB / RNA-KG
  Collection of tutorials to build RNA-KG v2.0 from scratch and for reproducing experiments such as "context-aware" KG pruning, clustering,…
  ☆24Updated 2 weeks ago
• boscoh / uniprot
  retrieve protein sequence identifiers and metadata from http://uniprot.org
  ☆68Updated 3 years ago
• broadinstitute / g2papi
  Python Client Library for the G2P Portal API
  ☆12Updated 2 weeks ago
• PathwayCommons / factoid
  A project to capture biological pathway data from academic papers
  ☆29Updated 5 months ago
• mfitzp / padua
  Proteomic Data Analysis with Python (pandas, scikit-learn, numpy, scipy)
  ☆24Updated 2 years ago