adam-sam-brown / repoDBLinks
A Standard Database for Drug Repositioning
☆19Updated 8 years ago
Alternatives and similar repositories for repoDB
Users that are interested in repoDB are comparing it to the libraries listed below
Sorting:
- ☆11Updated 5 years ago
- Python package for access to online biomedical resources, usually via REST APIs.☆18Updated last month
- A database of paths that represent the mechanism of action from a drug to a disease in an indication.☆65Updated last week
- Scripts and resources to create Hetionet v1.0, a heterogeneous network for drug repurposing☆32Updated 8 years ago
- A resource of adverse drug effects extracted from FDA structured product labels☆84Updated 5 months ago
- ☆22Updated 2 years ago
- A computational library for learning and evaluating biological knowledge graph embeddings - please see the main PyKEEN repo at https://gi…☆45Updated 3 years ago
- 🪝 What's the latest version for each database?☆27Updated 2 weeks ago
- Collection of tutorials to build RNA-KG v2.0 from scratch and for reproducing experiments such as "context-aware" KG pruning, clustering,…☆26Updated 2 months ago
- Provided files are a partial extraction of the Orphanet knowledge base on Rare Diseases☆52Updated 4 months ago
- ☆58Updated 5 years ago
- Build PharMeBINet from different sources.☆20Updated 3 weeks ago
- Code to build the Target Central Resource Database (TCRD).☆11Updated 4 years ago
- ☆20Updated 5 years ago
- Toolbox - generic utilities for data processing (e.g., parsing, proximity, guild scoring, etc...)☆113Updated 3 years ago
- Cataloging pharmacotherapies in clinical trial from ClinicalTrials.gov☆27Updated 9 years ago
- Example code and data samples for "An experimentally validated approach to automated biological evidence generation in drug discovery usi…☆12Updated last year
- Hetnets in Python (relocated from dhimmel/hetio)☆99Updated 2 months ago
- ☆69Updated 2 years ago
- A Python package for drug discovery by analyzing causal paths on multiscale networks☆28Updated last year
- code for Gogleva et al manuscript☆46Updated 2 years ago
- Library of Integrated Cellular Signatures L1000☆31Updated 3 years ago
- Adverse Outcome Pathway Ontology☆12Updated last year
- ☆39Updated 7 years ago
- Retrieve and process PubTator annotations☆44Updated 2 years ago
- biochem4j: integrated and extensible biochemical knowledge through graph databases☆12Updated 7 years ago
- Network-based Drug Repurposing for Human Coronavirus☆40Updated 5 years ago
- Source code for the R package, "dbparser" (i.e. DrugBank Parser)☆63Updated last month
- Synthetic lethality (SL) is a promising gold mine for the discovery of anti-cancer drug targets. KG4SL is the first graph neural network …☆34Updated 2 years ago
- Harmonizing pathway databases using Biological Expression Language (BEL)☆20Updated last year