NCATSTranslator / ReasonerAPI
NCATS Biomedical Translator Reasoners Standard API
☆34Updated last month
Related projects: ⓘ
- Software repo for Team Expander Agent (Oregon State U., Institute for Systems Biology, and Penn State U.)☆33Updated this week
- Github repo for the Experimental Factor Ontology (EFO)☆54Updated this week
- ☆9Updated last week
- First pass at a thin wrapper around the Monarch API and ChatGPT plugin☆13Updated 11 months ago
- 🗺️ Community curated and predicted equivalences and related mappings between named biological entities that are not available from prima…☆50Updated last month
- Version 4 of the EMBL-EBI Ontology Lookup Service (OLS)☆39Updated this week
- The Unified Phenotype Ontology (uPheno) integrates multiple phenotype ontologies into a unified cross-species phenotype ontology.☆76Updated this week
- Integrated OBO ontology store☆42Updated 3 weeks ago
- A framework for empirical evaluation of phenotype matching and prioritisation☆12Updated this week
- A tutorial on using Open Biological and Biomedical Ontologies (OBO)☆54Updated 5 years ago
- DEPRECATED: replaced by linkml☆23Updated 3 years ago
- A package to transform all OBO ontologies into KGX TSV format and OBO json, and put the transformed graph in KGhub☆28Updated 6 months ago
- A collection of useful python functions for looking up information and working with the Biolink Model☆20Updated last month
- KGX is a Python library for exchanging Knowledge Graphs☆114Updated last month
- Ontology Access Kit: A python library and command line application for working with ontologies☆113Updated 3 weeks ago
- Semantic data model of the set of common data elements for rare disease registration☆12Updated 10 months ago
- OBO Organized Knowledge: Training materials for becoming an OBO engineer☆91Updated this week
- Repo to organise the mouse-human phenotype mapping initiative and reconcile resources.☆13Updated 5 months ago
- Medical action ontology☆49Updated this week
- A stitching platform for InXight☆16Updated last month
- LLM retrieval augmented generation agent for Monarch.☆18Updated 3 months ago
- The Ontology for Biomedical Investigations☆75Updated this week
- phenol: Phenotype ontology library☆23Updated 2 months ago
- Java library to map LOINC-encoded test results to Human Phenotype Ontology☆29Updated 8 months ago
- LLM-driven curation assist tool (pre-alpha)☆57Updated last week
- OMOP2OBO: A Python Library for mapping OMOP standardized clinical terminologies to Open Biomedical Ontologies☆83Updated 11 months ago
- The symptom ontology was designed around the guiding concept of a symptom being: “A perceived change in function, sensation or appearance…☆35Updated 3 months ago
- CRDC-H model in LinkML, developed by the Center for Cancer Data Harmonization (CCDH)☆16Updated 2 years ago
- Schema and generated objects for biolink data model and upper ontology☆170Updated last week
- Evidence & Conclusion Ontology development site: Use ISSUES to request terms. See WIKI for how to request terms. See README for how to c…☆47Updated 2 months ago