BioDepot / nbdockerLinks
A Jupyter Notebook extension for Docker
☆15Updated 6 years ago
Alternatives and similar repositories for nbdocker
Users that are interested in nbdocker are comparing it to the libraries listed below
Sorting:
- ☆10Updated last week
- Publication and sharing with Jupyter notebooks for reproducible research☆10Updated 6 years ago
- beRi "beri environments for R installations" is an R environment, R installation, and R package management system for R☆14Updated 5 years ago
- An implementation of Nextflow.io with Language Workbench Technology. The project helps create computational pipelines that run with the N…☆22Updated 9 years ago
- IPython2CWL is a tool for converting IPython Jupyter Notebooks to CWL Command Line Tools by simply providing typing annotation.☆15Updated 2 years ago
- The SnoVault general purpose hybrid object-relational database☆16Updated last year
- Repository with information about the BioHackathon hosted in Paris in Nov 2018☆28Updated 4 years ago
- Framework for running text mining tools on latest publications. Main page at:☆14Updated 3 years ago
- Butler is a framework for running scientific workflows on public and academic clouds.☆69Updated 5 years ago
- Cytoscape.js API support in JS, Python, and R Jupyter kernels☆10Updated 7 years ago
- Continuous administration of the Greene Lab's electronic scrum☆13Updated this week
- Deprecated☆100Updated 6 years ago
- A tool for running bioinformatics workflows locally or in the cloud.☆30Updated 5 years ago
- Generation of CWL programmatically. Available types: CommandLineTool and DockerRequirement☆29Updated 5 years ago
- visJS2jupyter is a tool to bring the interactivity of networks created with vis.js into jupyter notebook cells☆78Updated 2 years ago
- Create cwl workflows by writing a simple Python script☆40Updated 5 years ago
- A web tool that helps biomedical researchers understand how their work is being used by others, by analyzing the content in papers that c…☆13Updated 6 years ago
- LEGACY repository for SODAR Core, preserved for saving review-related issues. See "sodar-core" for the up-to-date repository.☆15Updated 3 years ago
- This repository is meant for the participants of the BioHackathon hosted in Paris in Nov 2019 to share ideas, create issues, manage proje…☆24Updated 4 years ago
- Subclassification of disease states based on the intersection of literature and expression☆12Updated 6 years ago
- transparently build CWL and Galaxy XML tool definitions for any script that uses argparse☆27Updated 10 months ago
- ☆11Updated 2 years ago
- Mulled - Automatized Containerized Software Repository☆66Updated last year
- ☆11Updated 9 months ago
- Lab notebook for people who like the command line.☆11Updated last year
- ☆21Updated 2 years ago
- ☆25Updated 9 years ago
- Big Data Bag Utilities☆51Updated 2 months ago
- A web application to view and share Common Workflow Language workflows☆47Updated last week
- Computational reproducibility using Continuous Integration to produce verifiable end-to-end runs of scientific analysis.☆82Updated 4 years ago