Alternatives and similar repositories for nbdocker:

Users that are interested in nbdocker are comparing it to the libraries listed below

• Reproducible-Science-Curriculum / publication-RR-Jupyter
  Publication and sharing with Jupyter notebooks for reproducible research
  ☆10Updated 5 years ago
• ENCODE-DCC / snovault
  The SnoVault general purpose hybrid object-relational database
  ☆16Updated last year
• BioInterchange / Ontologies
  Home of the Genomic Feature and Variation Ontology (GFVO)
  ☆16Updated 4 years ago
• CampagneLaboratory / NextflowWorkbench
  An implementation of Nextflow.io with Language Workbench Technology. The project helps create computational pipelines that run with the N…
  ☆22Updated 8 years ago
• molpopgen / BigDataFormats
  Tutorial on programming or "big data"/bioinformatics
  ☆32Updated 7 years ago
• NCBI-Hackathons / PubRunner
  Framework for running text mining tools on latest publications. Main page at:
  ☆14Updated 2 years ago
• odewahn / publishing-workflows-for-jupyter
  ☆13Updated 10 years ago
• hacchy1983 / CWL-workflows
  Workflows written in common workflow language (CWL)
  ☆14Updated 6 years ago
• sdvillal / jagged
  Efficient storage of same-type, uneven-size arrays
  ☆11Updated 6 years ago
• wormtable / wormtable
  Write-once-read-many table for large datasets.
  ☆27Updated last year
• FDA / fda-hive
  FDA High-performance Integrated Virtual Environment (HIVE)
  ☆37Updated 4 years ago
• googlegenomics / datalab-examples
  Example Cloud Datalab iPython Notebooks for genomics use cases.
  ☆25Updated 7 years ago
• lgautier / mashing-pumpkins
  Minhash and maxhash library in Python, combining flexibility, expressivity, and performance.
  ☆21Updated 3 months ago
• cytoscape / jupyter-cytoscape
  Cytoscape.js API support in JS, Python, and R Jupyter kernels
  ☆10Updated 7 years ago
• broadinstitute / gene-hints
  Discoverability for gene search
  ☆12Updated 2 years ago
• BD2KGenomics / cgcloud
  Image and VM management for Jenkins, Spark and Mesos clusters in EC2
  ☆22Updated 4 years ago
• datasnakes / beRi
  beRi "beri environments for R installations" is an R environment, R installation, and R package management system for R
  ☆14Updated 5 years ago
• activepapers / activepapers-python
  Python edition of ActivePapers
  ☆41Updated last year
• TrackingJupyter / archive
  Searchable archive of Tracking Jupyter newsletters
  ☆15Updated 4 years ago
• related-sciences / platform-pipe
  Open Targets evidence normalization and scoring pipeline
  ☆12Updated 2 years ago
• MaayanLab / FAIRshake
  ☆10Updated 5 months ago
• hartwigmedical / pipeline-perl
  Pipeline of tools to process raw fastq data and produce meaningful genomic data
  ☆14Updated 5 years ago
• damianavila / vIPer
  vIPer: a new tool for IPython notebooks.
  ☆60Updated 10 years ago
• Reproducible-Science-Curriculum / Reproducible-Science-Hackathon-Dec-08-2014
  Workshop bringing together individuals interested in developing curriculum, workflows, and tools to strengthen reproducibility in researc…
  ☆33Updated 9 years ago
• opentargets-archive / data_pipeline
  Code for the data processing pipeline
  ☆17Updated 3 years ago
• ismms-himc / codex_dashboard
  Single Cell Multiplexed Imaging Jupyter Voila Dashboard using CODEX Data
  ☆16Updated last year
• nmdp-bioinformatics / dash
  Data Standards Hackathon for NGS based typing.
  ☆13Updated last month
• cytoscape / cy-jupyterlab
  Jupyter lab widget for rendering graphs (networks)
  ☆24Updated 2 years ago
• pubseq / bh20-seq-resource
  Tool to upload SARS-CoV-2 sequences to BH20 Arvados instance and orchestrate analysis
  ☆13Updated 2 years ago
• singularityware / singularityware.github.io
  base documentation site for Singularity software
  ☆27Updated 3 years ago