BioDepot / nbdockerLinks
A Jupyter Notebook extension for Docker
☆15Updated 6 years ago
Alternatives and similar repositories for nbdocker
Users that are interested in nbdocker are comparing it to the libraries listed below
Sorting:
- ☆10Updated 4 months ago
- Publication and sharing with Jupyter notebooks for reproducible research☆10Updated 6 years ago
- Berkeley's Data8 Infrastructure specific documentation & guides☆10Updated 5 years ago
- Manuscript describing open collaborative writing with Manubot☆50Updated 5 years ago
- Framework for running text mining tools on latest publications. Main page at:☆14Updated 3 years ago
- beRi "beri environments for R installations" is an R environment, R installation, and R package management system for R☆14Updated last month
- visJS2jupyter is a tool to bring the interactivity of networks created with vis.js into jupyter notebook cells☆78Updated 2 years ago
- Spark VCF data source implementation for Dataframes☆15Updated 3 years ago
- 📖 Generation and Applications of Knowledge Graphs in Systems and Networks Biology☆30Updated 6 years ago
- Cytoscape.js API support in JS, Python, and R Jupyter kernels☆10Updated 8 years ago
- Generation of CWL programmatically. Available types: CommandLineTool and DockerRequirement☆30Updated 5 years ago
- An implementation of Nextflow.io with Language Workbench Technology. The project helps create computational pipelines that run with the N…☆22Updated 9 years ago
- IPython2CWL is a tool for converting IPython Jupyter Notebooks to CWL Command Line Tools by simply providing typing annotation.☆17Updated 2 months ago
- ☆11Updated last year
- FAIR Genomes semantic metadata model. The core is a YAML file, which is transformed into all other desired output formats.☆13Updated 2 months ago
- Keeping track of activities around research data☆33Updated 9 months ago
- Repository with information about the BioHackathon hosted in Paris in Nov 2018☆28Updated 4 years ago
- Continuous administration of the Greene Lab's electronic scrum☆13Updated this week
- Butler is a framework for running scientific workflows on public and academic clouds.☆70Updated 5 years ago
- Introduction to Workflows with Common Workflow Language☆11Updated last year
- The Research Software Directory is a content management system that is tailored to software.☆47Updated last year
- A tool for running bioinformatics workflows locally or in the cloud.☆30Updated 6 years ago
- Big Data Bag Utilities☆52Updated last week
- The Gene Ontology Helpdesk☆16Updated 2 weeks ago
- scientific filesystem: a filesystem organization for scientific software and metadata☆35Updated 2 years ago
- Risa allows to access metadata/data in ISA-tab format and builds Bioconductor data structures. Apart from parsing ISA-tab files, the pack…☆20Updated 7 years ago
- A web application to view and share Common Workflow Language workflows☆47Updated this week
- TheSparkBox is an all-in-one Spark deployment that you can use to fire up a local cluster.☆12Updated 7 years ago
- Create cwl workflows by writing a simple Python script☆40Updated 5 years ago
- This repo is for the metadata schemas associated with the HCA☆69Updated 2 weeks ago